ggKbase home page

RIFOXYD12_FULL_Deltaproteobacteria_53_23_rifoxyd3_full_scaffold_1652_11

Organism: Deltaproteobacteria bacterium RIFOXYD12_FULL_53_23

near complete RP 43 / 55 BSCG 42 / 51 ASCG 11 / 38 MC: 2
Location: comp(7494..7973)

Top 3 Functional Annotations

Value Algorithm Source
chemotaxis protein CheD; K03411 chemotaxis protein CheD [EC:3.5.1.44] Tax=RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 159.0
  • Bit_score: 319
  • Evalue 2.80e-84
Probable chemoreceptor glutamine deamidase CheD id=4567197 bin=GWF2_Syntrophobacterales_56_9 species=unknown genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 91.9
  • Coverage: 160.0
  • Bit_score: 296
  • Evalue 1.40e-77
chemotaxis protein CheD similarity KEGG
DB: KEGG
  • Identity: 81.8
  • Coverage: 159.0
  • Bit_score: 269
  • Evalue 5.00e-70

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 480
ATGAAAATAATCGTTGGCATTTCAGACATGAAAGTCAGCAACAAGTCTGACGATGTTCTGATTACCTATTCACTTGGCTCCTGCATCGGGGTGGTTATTTGGGATCCGGTGGCCAAGGTTGGAGGAATGTTGCATTATATGCTGCCGGATTCTAATCTTGATTTGGATAAGGCGACAGCTAAGCCCTTTATGTTTGCAGATACAGGGATCCCCCGGCTGTTTAAAGAAACGTATAAGTTTGGAGCCATTAAAACTCGTTTGATTGTTAAGGTGGTTGGCGGTTCGCAAATCATGGACAATGCCGGGATTTTTAATATTGGTAAACGGAACCAGGCTGTTATGAGGAAGATGTTCTGGAAAAACCAGATTATGCTCGCGAAGGAAGATGTGGGCGGTACAGGTAACCGCACGGTTAGTTTGGAGATTGGGACAGGGACTACTCATCTTAAAGTGTCTGGAAGAGGGGAGTTTGAGTTATGA
PROTEIN sequence
Length: 160
MKIIVGISDMKVSNKSDDVLITYSLGSCIGVVIWDPVAKVGGMLHYMLPDSNLDLDKATAKPFMFADTGIPRLFKETYKFGAIKTRLIVKVVGGSQIMDNAGIFNIGKRNQAVMRKMFWKNQIMLAKEDVGGTGNRTVSLEIGTGTTHLKVSGRGEFEL*