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RIFOXYD12_FULL_Deltaproteobacteria_53_23_rifoxyd3_full_scaffold_1652

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Displaying 21 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFOXYD12_FULL_Deltaproteobacteria_53_23_rifoxyd3_full_scaffold_1652_1
RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..570
DNA (570bp) protein (190aa)
Pyridoxine 5''-phosphate synthase n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PI77_DESSD
pyridoxine 5''-phosphate synthase Tax=RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated
pyridoxine 5''-phosphate synthase
RIFOXYD12_FULL_Deltaproteobacteria_53_23_rifoxyd3_full_scaffold_1652_2
RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(590..1123)
DNA (534bp) protein (178aa)
Sec-independent protein translocase protein TatC n=1 Tax=uncultured bacterium RepID=K1YVF1_9BACT
tatC; Sec-independent protein translocase TatC; K03118 sec-independent protein translocase protein TatC Tax=RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated
tatC; Sec-independent protein translocase TatC
RIFOXYD12_FULL_Deltaproteobacteria_53_23_rifoxyd3_full_scaffold_1652_3
RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1132..1353)
DNA (222bp) protein (74aa)
Sec-independent protein secretion pathway component TatC Tax=RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated
Sec-independent periplasmic protein translocase id=4567188 bin=GWF2_Syntrophobacterales_56_9 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
Sec-independent protein secretion pathway component TatC
RIFOXYD12_FULL_Deltaproteobacteria_53_23_rifoxyd3_full_scaffold_1652_4
RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1397..2116)
DNA (720bp) protein (240aa)
5-formyltetrahydrofolate cyclo-ligase Tax=RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated
5-formyltetrahydrofolate cyclo-ligase id=4567190 bin=GWF2_Syntrophobacterales_56_9 species=Desulfurivibrio alkaliphilus genus=Desulfurivibrio taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
5-formyltetrahydrofolate cyclo-ligase
RIFOXYD12_FULL_Deltaproteobacteria_53_23_rifoxyd3_full_scaffold_1652_5
RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2271..3512)
DNA (1242bp) protein (414aa)
peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 Tax=RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated
Peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 id=4567191 bin=GWF2_Syntrophobacterales_56_9 species=Desulfobulbus propionicus genus=Desulfobulbus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
D-alanyl-D-alanine carboxypeptidase
RIFOXYD12_FULL_Deltaproteobacteria_53_23_rifoxyd3_full_scaffold_1652_6
RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3699..4247
DNA (549bp) protein (183aa)
hypothetical protein Tax=RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated
Methylated-DNA--protein-cysteine methyltransferase id=4567192 bin=GWF2_Syntrophobacterales_56_9 species=Neptuniibacter caesariensis genus=Neptuniibacter taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
methylated-DNA--protein-cysteine methyltransferase
RIFOXYD12_FULL_Deltaproteobacteria_53_23_rifoxyd3_full_scaffold_1652_7
RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4415..5446)
DNA (1032bp) protein (344aa)
response regulator receiver modulated chemotaxis protein CheB (EC:3.1.1.61); K03412 two-component system, chemotaxis family, response regulator CheB [EC:3.1.1.61] Tax=RIFOXYD12_FULL_Deltaproteobacteri
response regulator receiver modulated chemotaxis protein CheB (EC:3.1.1.61) rbh
Chemotaxis response regulator protein-glutamate methylesterase id=4567193 bin=GWF2_Syntrophobacterales_56_9 species=Desulfurivibrio alkaliphilus genus=Desulfurivibrio taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
RIFOXYD12_FULL_Deltaproteobacteria_53_23_rifoxyd3_full_scaffold_1652_8
RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5561..6019)
DNA (459bp) protein (153aa)
hypothetical protein Tax=RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated
Putative uncharacterized protein id=4567194 bin=GWF2_Syntrophobacterales_56_9 species=Desulfurivibrio alkaliphilus genus=Desulfurivibrio taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
hypothetical protein
RIFOXYD12_FULL_Deltaproteobacteria_53_23_rifoxyd3_full_scaffold_1652_9
RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6191..6628)
DNA (438bp) protein (146aa)
response regulator receiver protein; K03413 two-component system, chemotaxis family, response regulator CheY Tax=RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated
Response regulator receiver id=4567195 bin=GWF2_Syntrophobacterales_56_9 species=delta proteobacterium MLMS-1 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
response regulator receiver protein
RIFOXYD12_FULL_Deltaproteobacteria_53_23_rifoxyd3_full_scaffold_1652_10
RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6652..7497)
DNA (846bp) protein (282aa)
metal dependent phosphohydrolase Tax=RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated
HDIG id=4567196 bin=GWF2_Syntrophobacterales_56_9 species=delta proteobacterium MLMS-1 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
metal dependent phosphohydrolase
RIFOXYD12_FULL_Deltaproteobacteria_53_23_rifoxyd3_full_scaffold_1652_11
RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7494..7973)
DNA (480bp) protein (160aa)
chemotaxis protein CheD; K03411 chemotaxis protein CheD [EC:3.5.1.44] Tax=RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated
Probable chemoreceptor glutamine deamidase CheD id=4567197 bin=GWF2_Syntrophobacterales_56_9 species=unknown genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
chemotaxis protein CheD
RIFOXYD12_FULL_Deltaproteobacteria_53_23_rifoxyd3_full_scaffold_1652_12
RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8256..9116)
DNA (861bp) protein (287aa)
chemotaxis protein CheR (EC:2.1.1.80); K00575 chemotaxis protein methyltransferase CheR [EC:2.1.1.80] Tax=RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated
chemotaxis protein CheR (EC:2.1.1.80)
Chemotaxis protein methyltransferase n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NT40_9DELT
RIFOXYD12_FULL_Deltaproteobacteria_53_23_rifoxyd3_full_scaffold_1652_13
RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9292..9792)
DNA (501bp) protein (167aa)
CheW-like protein n=1 Tax=uncultured bacterium RepID=K1YDI2_9BACT
chemotaxis protein CheW; K03408 purine-binding chemotaxis protein CheW Tax=RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated
chemotaxis protein CheW
RIFOXYD12_FULL_Deltaproteobacteria_53_23_rifoxyd3_full_scaffold_1652_14
RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9829..10050
DNA (222bp) protein (74aa)
Tax=RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated
RIFOXYD12_FULL_Deltaproteobacteria_53_23_rifoxyd3_full_scaffold_1652_15
RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10062..12383)
DNA (2322bp) protein (774aa)
chemotaxis protein CheA; K03407 two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] Tax=RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated
CheA signal transduction histidine kinase n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z4A4_DESAT
chemotaxis protein CheA
RIFOXYD12_FULL_Deltaproteobacteria_53_23_rifoxyd3_full_scaffold_1652_16
RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12926..14566
DNA (1641bp) protein (547aa)
Lytic transglycosylase catalytic; K08307 membrane-bound lytic murein transglycosylase D [EC:3.2.1.-] Tax=RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated
Lytic transglycosylase catalytic n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z4A7_DESAT
Lytic transglycosylase catalytic
RIFOXYD12_FULL_Deltaproteobacteria_53_23_rifoxyd3_full_scaffold_1652_17
RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14656..15498
DNA (843bp) protein (281aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z4A8_DESAT
short-chain dehydrogenase/reductase SDR Tax=RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated
short-chain dehydrogenase/reductase SDR
RIFOXYD12_FULL_Deltaproteobacteria_53_23_rifoxyd3_full_scaffold_1652_18
RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15546..16277)
DNA (732bp) protein (244aa)
ribonuclease III; K03685 ribonuclease III [EC:3.1.26.3] Tax=RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated
Ribonuclease 3 n=1 Tax=Desulfotalea psychrophila (strain LSv54 / DSM 12343) RepID=RNC_DESPS
ribonuclease III
RIFOXYD12_FULL_Deltaproteobacteria_53_23_rifoxyd3_full_scaffold_1652_19
RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16482..16694
DNA (213bp) protein (71aa)
Thiamine biosynthesis protein ThiS n=1 Tax=Chlorobium phaeobacteroides (strain BS1) RepID=B3EN71_CHLPB
thiamine biosynthesis protein ThiS; K03154 sulfur carrier protein Tax=RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated
thiamine biosynthesis protein ThiS
RIFOXYD12_FULL_Deltaproteobacteria_53_23_rifoxyd3_full_scaffold_1652_20
RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16691..17926
DNA (1236bp) protein (412aa)
O-acetylhomoserine aminocarboxypropyltransferase (EC:2.5.1.49); K01740 O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] Tax=RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated
O-acetylhomoserine aminocarboxypropyltransferase (EC:2.5.1.49) rbh
O-acetylhomoserine aminocarboxypropyltransferase n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z200_DESAT
RIFOXYD12_FULL_Deltaproteobacteria_53_23_rifoxyd3_full_scaffold_1652_21
RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17961..18530
DNA (570bp) protein (190aa)
UBA/THIF-type NAD/FAD binding fold:MoeZ/MoeB n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NS61_9DELT
UBA/THIF-type NAD/FAD binding protein Tax=RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated
UBA/THIF-type NAD/FAD binding protein
Displaying 21 items

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