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RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_93

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Displaying items 1-30 of 108 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_93_1
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..105
DNA (105bp) protein (35aa)
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_93_2
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(184..681)
DNA (498bp) protein (166aa)
Sec-independent protein translocase protein TatC n=1 Tax=uncultured bacterium RepID=K1YVF1_9BACT
twin arginine targeting protein translocase subunit TatC Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
twin arginine targeting protein translocase subunit TatC
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_93_3
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(720..935)
DNA (216bp) protein (72aa)
Sec-independent protein secretion pathway component TatC Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
Sec-independent periplasmic protein translocase id=4567188 bin=GWF2_Syntrophobacterales_56_9 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
Sec-independent protein secretion pathway component TatC
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_93_4
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(974..1672)
DNA (699bp) protein (233aa)
5-formyltetrahydrofolate cyclo-ligase Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
5-formyltetrahydrofolate cyclo-ligase id=4567190 bin=GWF2_Syntrophobacterales_56_9 species=Desulfurivibrio alkaliphilus genus=Desulfurivibrio taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
5-formyltetrahydrofolate cyclo-ligase
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_93_5
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1755..2933)
DNA (1179bp) protein (393aa)
D-alanyl-D-alanine carboxypeptidase Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
Peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 id=4567191 bin=GWF2_Syntrophobacterales_56_9 species=Desulfobulbus propionicus genus=Desulfobulbus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
D-alanyl-D-alanine carboxypeptidase
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_93_6
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3170..4201)
DNA (1032bp) protein (344aa)
response regulator receiver modulated chemotaxis protein CheB (EC:3.1.1.61); K03412 two-component system, chemotaxis family, response regulator CheB [EC:3.1.1.61] Tax=RIFOXYD12_FULL_Deltaproteobacteri
response regulator receiver modulated chemotaxis protein CheB (EC:3.1.1.61)
Chemotaxis response regulator protein-glutamate methylesterase id=4567193 bin=GWF2_Syntrophobacterales_56_9 species=Desulfurivibrio alkaliphilus genus=Desulfurivibrio taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_93_7
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4319..4777)
DNA (459bp) protein (153aa)
hypothetical protein Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
Putative uncharacterized protein id=4567194 bin=GWF2_Syntrophobacterales_56_9 species=Desulfurivibrio alkaliphilus genus=Desulfurivibrio taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
hypothetical protein
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_93_8
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5092..5529)
DNA (438bp) protein (146aa)
response regulator receiver protein; K03413 two-component system, chemotaxis family, response regulator CheY Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
Response regulator receiver id=4567195 bin=GWF2_Syntrophobacterales_56_9 species=delta proteobacterium MLMS-1 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
response regulator receiver protein
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_93_9
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5554..6399)
DNA (846bp) protein (282aa)
metal dependent phosphohydrolase Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
HDIG id=4567196 bin=GWF2_Syntrophobacterales_56_9 species=delta proteobacterium MLMS-1 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
metal dependent phosphohydrolase
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_93_10
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6396..6875)
DNA (480bp) protein (160aa)
chemotaxis protein CheD; K03411 chemotaxis protein CheD [EC:3.5.1.44] Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
Probable chemoreceptor glutamine deamidase CheD id=4567197 bin=GWF2_Syntrophobacterales_56_9 species=unknown genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
chemotaxis protein CheD
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_93_11
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7123..7974)
DNA (852bp) protein (284aa)
chemotaxis protein CheR (EC:2.1.1.80); K00575 chemotaxis protein methyltransferase CheR [EC:2.1.1.80] Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
chemotaxis protein CheR (EC:2.1.1.80)
Chemotaxis protein methyltransferase n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NT40_9DELT
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_93_12
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8014..8514)
DNA (501bp) protein (167aa)
CheW-like protein n=1 Tax=uncultured bacterium RepID=K1YDI2_9BACT
chemotaxis protein CheW; K03408 purine-binding chemotaxis protein CheW Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
chemotaxis protein CheW
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_93_13
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8560..10851)
DNA (2292bp) protein (764aa)
chemotaxis protein CheA; K03407 two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
CheA signal transduction histidine kinase n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z4A4_DESAT
chemotaxis protein CheA
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_93_14
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11637..13220
DNA (1584bp) protein (528aa)
Lytic transglycosylase catalytic; K08307 membrane-bound lytic murein transglycosylase D [EC:3.2.1.-] Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
Lytic transglycosylase catalytic n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z4A7_DESAT
Lytic transglycosylase catalytic
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_93_15
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13414..14229
DNA (816bp) protein (272aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NT46_9DELT
short-chain dehydrogenase/reductase SDR Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
short-chain dehydrogenase/reductase SDR
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_93_16
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14385..14678)
DNA (294bp) protein (98aa)
Putative uncharacterized protein n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z4A9_DESAT
hypothetical protein Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
hypothetical protein
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_93_17
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14857..15366
DNA (510bp) protein (170aa)
CMP/dCMP deaminase zinc-binding protein n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z647_DESAT
CMP/dCMP deaminase zinc-binding protein Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
CMP/dCMP deaminase zinc-binding protein
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_93_18
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15381..16397
DNA (1017bp) protein (339aa)
Radical SAM domain protein n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z4B0_DESAT
Radical SAM domain protein Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
Radical SAM domain protein
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_93_19
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16497..16793)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Cyclobacteriaceae bacterium AK24 RepID=R7ZMQ2_9BACT
hypothetical protein Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
hypothetical protein
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_93_20
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16765..16884)
DNA (120bp) protein (40aa)
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_93_21
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17306..18901
DNA (1596bp) protein (532aa)
Imidazole glycerol phosphate synthase, glutamine amidotransferase subunit n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PDW1_DESSD
imidazole glycerol phosphate synthase, glutamine amidotransferase subunit Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
imidazole glycerol phosphate synthase, glutamine amidotransferase subunit
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_93_22
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19313..19537
DNA (225bp) protein (75aa)
preprotein translocase subunit TatB
Preprotein translocase subunit TatB Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_93_23
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19583..20110
DNA (528bp) protein (176aa)
Uncharacterized protein n=3 Tax=Caldicellulosiruptor RepID=A4XLU6_CALS8
hypothetical protein Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
hypothetical protein
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_93_24
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20139..22718
DNA (2580bp) protein (860aa)
PAS domain S-box n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1P054_DESSD
PAS domain S-box Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
PAS domain S-box
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_93_25
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22968..24017)
DNA (1050bp) protein (350aa)
Uncharacterized protein n=2 Tax=Geobacter metallireducens RepID=Q39WD9_GEOMG
hypothetical protein Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
hypothetical protein
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_93_26
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24101..25486)
DNA (1386bp) protein (462aa)
Uncharacterized protein n=2 Tax=Geobacter sulfurreducens RepID=D7AHZ4_GEOSK
hypothetical protein Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
hypothetical protein
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_93_27
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25763..27100
DNA (1338bp) protein (446aa)
Long-chain fatty acid transport protein n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1P4J1_DESSD
long-chain fatty acid transport protein Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
long-chain fatty acid transport protein
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_93_28
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27244..28365)
DNA (1122bp) protein (374aa)
hypothetical protein n=1 Tax=beta proteobacterium L13 RepID=UPI00035DC46D
hypothetical protein Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
hypothetical protein
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_93_29
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28487..29335)
DNA (849bp) protein (283aa)
hypothetical protein n=1 Tax=Leucothrix mucor RepID=UPI0003B71E01
hypothetical protein Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_93_30
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29448..30179)
DNA (732bp) protein (244aa)
Twin-arginine translocation protein TatB (Fragment) n=1 Tax=uncultured bacterium RepID=K1YUH7_9BACT
Sec-independent protein translocase, TatC subunit; K03118 sec-independent protein translocase protein TatC Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
Sec-independent protein translocase, TatC subunit
Displaying items 1-30 of 108 in total

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