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RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_407

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_407_1
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..302)
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) RepID=C4XNG5_DESMR
hypothetical protein; K07497 putative transposase Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
hypothetical protein
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_407_2
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(319..582)
DNA (264bp) protein (88aa)
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_407_3
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(579..1043)
DNA (465bp) protein (155aa)
hypothetical protein Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
Putative uncharacterized protein id=2958783 bin=GWB1_Spirochaetes_59_5 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
hypothetical protein
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_407_4
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1040..1303)
DNA (264bp) protein (88aa)
hypothetical protein Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
Ner-like DNA-binding protein id=2958786 bin=GWB1_Spirochaetes_59_5 species=Oceanibaculum indicum genus=Oceanibaculum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
Ner
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_407_5
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1514..2176
DNA (663bp) protein (221aa)
Putative phage repressor n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RJG1_DESPD
putative phage repressor Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
putative phage repressor
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_407_6
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2515..3033
DNA (519bp) protein (173aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z0L6_DESAT
Fis family transcriptional regulator; K07713 two-component system, NtrC family, response regulator HydG Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
Fis family transcriptional regulator
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_407_7
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3045..4046)
DNA (1002bp) protein (334aa)
Thiamine biosynthesis protein n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RD47_DESPD
Thiamine biosynthesis protein Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
Thiamine biosynthesis protein
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_407_8
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4043..5719)
DNA (1677bp) protein (559aa)
DNA repair protein RecN n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z1E5_DESAT
DNA repair protein RecN; K03631 DNA repair protein RecN (Recombination protein N) Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
DNA repair protein RecN
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_407_9
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6047..7474
DNA (1428bp) protein (476aa)
Peptidase M48 Ste24p n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z1E4_DESAT
peptidase M48 Ste24p Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
peptidase M48 Ste24p
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_407_10
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7576..8322
DNA (747bp) protein (249aa)
FHA domain containing protein Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
FHA domain containing protein id=3242703 bin=GWF2_Lentisphaerae_50_93 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_407_11
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8491..9087
DNA (597bp) protein (199aa)
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_407_12
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9097..9897
DNA (801bp) protein (267aa)
Putative Fe-S cluster n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NNK8_9DELT
Fe-S cluster domain protein Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
Fe-S cluster domain protein
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_407_13
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10331..10582
DNA (252bp) protein (84aa)
Transcriptional regulator AbrB n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NUD9_9DELT
SpoVT/AbrB domain-containing protein Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
SpoVT/AbrB domain-containing protein
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_407_14
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10579..10974
DNA (396bp) protein (132aa)
Putative uncharacterized protein n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JSB2_9GAMM
hypothetical protein Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
hypothetical protein
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_407_15
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11865..13121
DNA (1257bp) protein (419aa)
Metal dependent phosphohydrolase n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G7E8_GEOUR
metal dependent phosphohydrolase Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
metal dependent phosphohydrolase
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_407_16
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13208..14263
DNA (1056bp) protein (352aa)
hypothetical protein Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
Membrane protein, UPF0118 superfamily id=3426040 bin=GWF2_Geobacter_54_21 species=Geobacter bemidjiensis genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Geobacter_54_21 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_407_17
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14343..14798
DNA (456bp) protein (152aa)
cytosine deaminase (EC:3.5.4.1); K01485 cytosine deaminase [EC:3.5.4.1] Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
cytosine deaminase (EC:3.5.4.1)
cytosine deaminase n=1 Tax=Singularimonas variicoloris RepID=UPI00035ED6D7
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_407_18
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15032..15712
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1ZSV6_9BACT
Uncharacterized protein Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_407_19
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15817..16347
DNA (531bp) protein (177aa)
NMD protein affecting ribosome stability and mRNA decay n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1P8L1_DESSD
NMD protein affecting ribosome stability and mRNA decay Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
NMD protein affecting ribosome stability and mRNA decay
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_407_20
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16474..17337
DNA (864bp) protein (288aa)
Phosphonate ABC transporter, periplasmic phosphonate-binding protein n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z3D1_DESAT
phosphonate ABC transporter, periplasmic phosphonate-binding protein; K02044 phosphonate transport system substrate-binding protein Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
phosphonate ABC transporter, periplasmic phosphonate-binding protein
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_407_21
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17341..19521
DNA (2181bp) protein (727aa)
PAS domain S-box n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1P054_DESSD
PAS domain S-box Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
PAS domain S-box
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_407_22
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19766..21838
DNA (2073bp) protein (691aa)
DNA topoisomerase n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1P191_DESSD
DNA topoisomerase III Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
DNA topoisomerase III
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_407_23
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22073..22774)
DNA (702bp) protein (234aa)
Response regulator receiver n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NQ36_9DELT
two component transcriptional regulator, winged helix family; K07657 two-component system, OmpR family, phosphate regulon response regulator PhoB Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
two component transcriptional regulator, winged helix family
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_407_24
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22820..23503)
DNA (684bp) protein (228aa)
Phosphate-specific transport system accessory protein PhoU n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z3Y9_DESAT
phosphate uptake regulator, PhoU; K02039 phosphate transport system protein Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
phosphate uptake regulator, PhoU
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_407_25
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24015..24803)
DNA (789bp) protein (263aa)
pstB; phosphate transporter ATP-binding protein; K02036 phosphate transport system ATP-binding protein [EC:3.6.3.27] Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
Phosphate import ATP-binding protein PstB n=1 Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=PSTB_PELCD
pstB-1; phosphate transporter ATP-binding protein
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_407_26
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24923..26515)
DNA (1593bp) protein (531aa)
pstA; phosphate ABC transporter permease; K02038 phosphate transport system permease protein Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
Phosphate ABC transporter, membrane protein PstA id=4728530 bin=GWC2_Pelobacter_58_13 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
pstA-1; phosphate ABC transporter membrane protein PstA
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_407_27
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26638..28860)
DNA (2223bp) protein (741aa)
hypothetical protein n=1 Tax=BRC1 bacterium SCGC AAA252-M09 RepID=UPI0003704FD2
phosphate ABC transporter permease; K02037 phosphate transport system permease protein Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
pstC-1; phosphate ABC transporter membrane protein PstC
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_407_28
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28998..29996)
DNA (999bp) protein (333aa)
phosphate ABC transporter periplasmic protein; K02040 phosphate transport system substrate-binding protein Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
Phosphate ABC transporter, periplasmic phosphate-binding protein id=4728528 bin=GWC2_Pelobacter_58_13 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
pstS-1; phosphate ABC transporter substrate-binding protein
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_407_29
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30362..30481
DNA (120bp) protein (40aa)
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
Displaying 29 items

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