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RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_227

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Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_227_1
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

73..843
DNA (771bp) protein (257aa)
sulfatase Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
Sulfatase id=4714181 bin=GWC2_Pelobacter_58_13 species=Desulfobulbus propionicus genus=Desulfobulbus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
sulfatase
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_227_2
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1087..1509)
DNA (423bp) protein (141aa)
Transcriptional regulator, MerR family n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z309_DESAT
MerR family transcriptional regulator Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
MerR family transcriptional regulator
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_227_3
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1519..1812)
DNA (294bp) protein (98aa)
Histone family protein DNA-binding protein n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z310_DESAT
histone family protein DNA-binding protein; K04764 integration host factor subunit alpha Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
histone family protein DNA-binding protein
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_227_4
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(1816..4239)
DNA (2424bp) protein (808aa)
phenylalanyl-tRNA synthetase, beta subunit; K01890 phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z311_DESAT
phenylalanyl-tRNA synthetase, beta subunit
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_227_5
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(4459..5469)
DNA (1011bp) protein (337aa)
phenylalanyl-tRNA synthetase, alpha subunit (EC:6.1.1.20); K01889 phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
phenylalanyl-tRNA synthetase, alpha subunit (EC:6.1.1.20)
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z312_DESAT
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_227_6
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(5487..5840)
DNA (354bp) protein (118aa)
50S ribosomal protein L20 n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NN42_9DELT
ribosomal protein L20; K02887 large subunit ribosomal protein L20 Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
ribosomal protein L20
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_227_7
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(5939..6136)
DNA (198bp) protein (66aa)
50S ribosomal protein L35 n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z314_DESAT
ribosomal protein L35; K02916 large subunit ribosomal protein L35 Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
ribosomal protein L35
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_227_8
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6302..6805)
DNA (504bp) protein (168aa)
Translation initiation factor IF-3 n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z315_DESAT
translation initiation factor IF-3; K02520 translation initiation factor IF-3 Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
translation initiation factor IF-3
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_227_9
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6934..8874)
DNA (1941bp) protein (647aa)
threonyl-tRNA synthetase (EC:6.1.1.3); K01868 threonyl-tRNA synthetase [EC:6.1.1.3] Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
threonyl-tRNA synthetase (EC:6.1.1.3)
Threonine--tRNA ligase n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z316_DESAT
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_227_10
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9393..10001)
DNA (609bp) protein (203aa)
Recombination protein RecR n=1 Tax=uncultured bacterium RepID=K1YUB5_9BACT
recombination protein RecR; K06187 recombination protein RecR Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
recombination protein RecR
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_227_11
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10096..10404)
DNA (309bp) protein (103aa)
Nucleoid-associated protein MldDRAFT_0473 n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NJL8_9DELT
hypothetical protein; K09747 hypothetical protein Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
hypothetical protein
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_227_12
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10605..12356)
DNA (1752bp) protein (584aa)
DNA polymerase III, subunits gamma and tau (EC:2.7.7.7); K02343 DNA polymerase III subunit gamma/tau [EC:2.7.7.7] Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
DNA polymerase III, subunits gamma and tau (EC:2.7.7.7)
DNA polymerase III, subunits gamma and tau id=2121039 bin=GWB2_Desulfobacterales_56_26 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_227_13
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13139..15040)
DNA (1902bp) protein (634aa)
Polysaccharide biosynthesis protein CapD n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z4L2_DESAT
polysaccharide biosynthesis protein CapD Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
polysaccharide biosynthesis protein CapD
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_227_14
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15116..15676)
DNA (561bp) protein (187aa)
Sugar transferase n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VT00_POLNA
sugar transferase; K13012 O-antigen biosynthesis protein WbqP Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
sugar transferase
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_227_15
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15940..17103)
DNA (1164bp) protein (388aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000372CDBA
glycosyl transferase, group 1 Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
glycosyl transferase, group 1
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_227_16
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17094..19088)
DNA (1995bp) protein (665aa)
Asparagine synthetase n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9WM99_9CYAN
asparagine synthase Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
asparagine synthase
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_227_17
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19097..19897)
DNA (801bp) protein (267aa)
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_227_18
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19894..21006)
DNA (1113bp) protein (371aa)
Group 1 glycosyl transferase n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KE54_HALAR
group 1 glycosyl transferase Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
group 1 glycosyl transferase
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_227_19
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21035..21721)
DNA (687bp) protein (229aa)
methylase involved in ubiquinone/menaquinone biosynthesis n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=UPI0001A30F2B id=31882 bin=ACD28 species=Planctomyces limnophilus genus=Planctomyces taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=ACD28 organism_group=PER (Peregrinibacteria) organism_desc=PER
hypothetical protein Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
hypothetical protein
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_227_20
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21714..23237)
DNA (1524bp) protein (508aa)
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_227_21
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23237..23845)
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Rhizobium etli bv. mimosae str. Mim1 RepID=S5RZT2_RHIET
hypothetical protein Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
hypothetical protein
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_227_22
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23925..25157)
DNA (1233bp) protein (411aa)
DegT/DnrJ/EryC1/StrS aminotransferase Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
Strongly similar to Arnb transferase id=4794255 bin=GWA2_Planctomycetia_40_7 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Planctomycetia_40_7 organism_group=Planctomycetes
DegT/DnrJ/EryC1/StrS aminotransferase
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_227_23
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25163..26056)
DNA (894bp) protein (298aa)
hypothetical protein Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
Methyltransferase type 11 id=4209595 bin=GWF2_Methylomirabilis_70_14 species=Leptonema illini genus=Leptonema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_227_24
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26053..26661)
DNA (609bp) protein (203aa)
Methionine biosynthesis protein MetW n=1 Tax=SAR116 cluster alpha proteobacterium HIMB100 RepID=G6A1Z4_9PROT
hypothetical protein Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
hypothetical protein
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_227_25
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26649..27251)
DNA (603bp) protein (201aa)
hypothetical protein (EC:2.3.1.-) id=31635 bin=ACD28 species=ACD28 genus=ACD28 taxon_order=ACD28 taxon_class=ACD28 phylum=PER tax=ACD28 organism_group=PER (Peregrinibacteria) organism_desc=PER
hexapaptide repeat-containing transferase Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
hexapaptide repeat-containing transferase
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_227_26
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27248..28324)
DNA (1077bp) protein (359aa)
Group 1 glycosyl transferase n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KB79_HALAR
group 1 glycosyl transferase Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
glycosyl transferase
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_227_27
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28321..29490)
DNA (1170bp) protein (390aa)
Glycosyltransferase n=1 Tax=Methanobacterium sp. Maddingley MBC34 RepID=K6UA14_9EURY
group 1 glycosyl transferase Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
group 1 glycosyl transferase
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_227_28
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29487..30524)
DNA (1038bp) protein (346aa)
hypothetical protein n=1 Tax=Fervidibacteria bacterium JGI 0000001-D5 RepID=UPI00035C3C55
hexosyltransferase 4 Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
hexosyltransferase 4
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_227_29
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30608..31579)
DNA (972bp) protein (324aa)
NAD-dependent epimerase/dehydratase; K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
NAD-dependent dehydratase n=2 Tax=Proteobacteria RepID=UPI000362373C
NAD-dependent epimerase/dehydratase
RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_227_30
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31621..32682)
DNA (1062bp) protein (354aa)
galE; UDP-galactose-4-epimerase (EC:5.1.3.2); K01784 UDP-glucose 4-epimerase [EC:5.1.3.2] Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
galE; UDP-galactose-4-epimerase (EC:5.1.3.2)
NAD-dependent epimerase/dehydratase:3-beta hydroxysteroid dehydrogenase/isomerase:Polysaccharide biosynthesis protein CapD:Nucleotide sugar epimerase n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NTS9_9DELT
Displaying items 1-30 of 47 in total

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