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rifoxyd3_full_scaffold_1077_curated

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifoxyd3_full_scaffold_1077_curated_1
RifOxyB12_full_Anaerolinea_60_12_curated, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(2..151)
DNA (150bp) protein (50aa)
map; methionine aminopeptidase (EC:3.4.11.18); K01265 methionyl aminopeptidase [EC:3.4.11.18]
Methionine aminopeptidase id=4954203 bin=GWC2_Chloroflexi_49_37 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWC2_Chloroflexi_49_37 organism_group=Chloroflexi organism_desc=Good +; Candidate for curation
Tax=RifOxyB12_full_Anaerolinea_60_12_curated
rifoxyd3_full_scaffold_1077_curated_2
RIFOXYC12_FULL_Chloroflexi_59_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(153..803)
DNA (651bp) protein (217aa)
adk; adenylate kinase (EC:2.7.4.3); K00939 adenylate kinase [EC:2.7.4.3]
Adenylate kinase id=2054639 bin=GWD2_Chloroflexi_49_16 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWD2_Chloroflexi_49_16 organism_group=Chloroflexi organism_desc=Good + rbh
Tax=RIFOXYC12_FULL_Chloroflexi_59_14_curated
rifoxyd3_full_scaffold_1077_curated_3
RIFOXYD12_FULL_Chloroflexi_57_15_curated, Chloroflexi, Bacteria

Not on your lists


comp(839..2212)
DNA (1374bp) protein (458aa)
Protein translocase subunit SecY id=2054636 bin=GWD2_Chloroflexi_49_16 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWD2_Chloroflexi_49_16 organism_group=Chloroflexi organism_desc=Good + rbh
secY; preprotein translocase secY subunit; K03076 preprotein translocase subunit SecY rbh
Tax=RIFOXYD12_FULL_Chloroflexi_57_15_curated
rifoxyd3_full_scaffold_1077_curated_4
RIFOXYC12_FULL_Chloroflexi_59_14_curated, Chloroflexi, Bacteria

Not on your lists


comp(2235..2690)
DNA (456bp) protein (152aa)
50S ribosomal protein L15 id=2182557 bin=GWB2_Chloroflexi_49_20 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
rplO; 50S ribosomal protein L15; K02876 large subunit ribosomal protein L15
Tax=RIFOXYC12_FULL_Chloroflexi_59_14_curated
rifoxyd3_full_scaffold_1077_curated_5
RIFOXYD12_FULL_Chloroflexi_57_15_curated, Chloroflexi, Bacteria

Not on your lists


comp(2698..2895)
DNA (198bp) protein (66aa)
50S ribosomal protein L30 id=4954199 bin=GWC2_Chloroflexi_49_37 species=Bacillus smithii genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Chloroflexi_49_37 organism_group=Chloroflexi organism_desc=Good +; Candidate for curation
rpmD; 50S ribosomal protein L30; K02907 large subunit ribosomal protein L30
Tax=RIFOXYD12_FULL_Chloroflexi_57_15_curated
rifoxyd3_full_scaffold_1077_curated_6
RIFOXYC12_FULL_Chloroflexi_59_14_curated, Chloroflexi, Bacteria

Not on your lists


comp(2888..3439)
DNA (552bp) protein (184aa)
30S ribosomal protein S5 id=2182555 bin=GWB2_Chloroflexi_49_20 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
rpsE; 30S ribosomal protein S5; K02988 small subunit ribosomal protein S5
Tax=RIFOXYC12_FULL_Chloroflexi_59_14_curated
rifoxyd3_full_scaffold_1077_curated_7
CG_Anaero_04, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists


comp(3457..3822)
DNA (366bp) protein (122aa)
50S ribosomal protein L18 id=1722556 bin=GWB2_Chloroflexi_54_36 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
rplR; 50S ribosomal protein L18; K02881 large subunit ribosomal protein L18
Tax=CG_Anaero_04
rifoxyd3_full_scaffold_1077_curated_8
RIFOXYD12_FULL_Chloroflexi_57_15_curated, Chloroflexi, Bacteria

Not on your lists


comp(3826..4374)
DNA (549bp) protein (183aa)
50S ribosomal protein L6 id=1722558 bin=GWB2_Chloroflexi_54_36 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
rplF; 50S ribosomal protein L6; K02933 large subunit ribosomal protein L6
Tax=RIFOXYD12_FULL_Chloroflexi_57_15_curated
rifoxyd3_full_scaffold_1077_curated_9
RIFOXYC12_FULL_Chloroflexi_59_14_curated, Chloroflexi, Bacteria

Not on your lists


comp(4392..4802)
DNA (411bp) protein (137aa)
30S ribosomal protein S8 n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N3N8_ANATU
rpsH; 30S ribosomal protein S8; K02994 small subunit ribosomal protein S8
Tax=RIFOXYC12_FULL_Chloroflexi_59_14_curated
rifoxyd3_full_scaffold_1077_curated_10
RifOxyB12_full_Anaerolinea_60_12_curated, Anaerolineae, Chloroflexi, Bacteria

Not on your lists


comp(4820..5002)
DNA (183bp) protein (61aa)
30S ribosomal protein S14 type Z n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N3N7_ANATU
rpsN; 30S ribosomal protein S14; K02954 small subunit ribosomal protein S14
Tax=RifOxyB12_full_Anaerolinea_60_12_curated
rifoxyd3_full_scaffold_1077_curated_11
RifOxyB12_full_Anaerolinea_60_12_curated, Anaerolineae, Chloroflexi, Bacteria

Not on your lists


comp(5006..5554)
DNA (549bp) protein (183aa)
50S ribosomal protein L5 id=2054620 bin=GWD2_Chloroflexi_49_16 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWD2_Chloroflexi_49_16 organism_group=Chloroflexi organism_desc=Good +
rplE; 50S ribosomal protein L5; K02931 large subunit ribosomal protein L5
Tax=RifOxyB12_full_Anaerolinea_60_12_curated
rifoxyd3_full_scaffold_1077_curated_12
RIFOXYC12_FULL_Chloroflexi_59_14_curated, Chloroflexi, Bacteria

Not on your lists


comp(5572..5904)
DNA (333bp) protein (111aa)
rplX; 50S ribosomal protein L24; K02895 large subunit ribosomal protein L24
50S ribosomal protein L24 id=1722564 bin=GWB2_Chloroflexi_54_36 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
Tax=RIFOXYC12_FULL_Chloroflexi_59_14_curated
rifoxyd3_full_scaffold_1077_curated_13
RIFOXYD12_FULL_Chloroflexi_57_15_curated, Chloroflexi, Bacteria

Not on your lists


comp(5926..6297)
DNA (372bp) protein (124aa)
50S ribosomal protein L14 id=1722566 bin=GWB2_Chloroflexi_54_36 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
rplN; 50S ribosomal protein L14; K02874 large subunit ribosomal protein L14
Tax=RIFOXYD12_FULL_Chloroflexi_57_15_curated
rifoxyd3_full_scaffold_1077_curated_14
RifOxyB12_full_Anaerolinea_60_12_curated, Anaerolineae, Chloroflexi, Bacteria

Not on your lists


comp(6294..6650)
DNA (357bp) protein (119aa)
30S ribosomal protein S17 id=2182540 bin=GWB2_Chloroflexi_49_20 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
rpsQ; 30S ribosomal protein S17; K02961 small subunit ribosomal protein S17
Tax=RifOxyB12_full_Anaerolinea_60_12_curated
rifoxyd3_full_scaffold_1077_curated_15
RIFOXYD12_FULL_Chloroflexi_57_15_curated, Chloroflexi, Bacteria

Not on your lists


comp(6647..6853)
DNA (207bp) protein (69aa)
50S ribosomal protein L29 n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N3N2_ANATU
rpmC; 50S ribosomal protein L29; K02904 large subunit ribosomal protein L29
Tax=RIFOXYD12_FULL_Chloroflexi_57_15_curated
rifoxyd3_full_scaffold_1077_curated_16
RifOxyB12_full_Anaerolinea_60_12_curated, Anaerolineae, Chloroflexi, Bacteria

Not on your lists


comp(6856..7275)
DNA (420bp) protein (140aa)
50S ribosomal protein L16 n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N3N1_ANATU
rplP; 50S ribosomal protein L16; K02878 large subunit ribosomal protein L16
Tax=RifOxyB12_full_Anaerolinea_60_12_curated
rifoxyd3_full_scaffold_1077_curated_17
RifOxyB12_full_Anaerolinea_60_12_curated, Anaerolineae, Chloroflexi, Bacteria

Not on your lists


comp(7321..8070)
DNA (750bp) protein (250aa)
30S ribosomal protein S3 n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N3N0_ANATU rbh
rpsC; 30S ribosomal protein S3; K02982 small subunit ribosomal protein S3 rbh
Tax=RifOxyB12_full_Anaerolinea_60_12_curated
rifoxyd3_full_scaffold_1077_curated_18
RIFOXYC12_FULL_Chloroflexi_59_14_curated, Chloroflexi, Bacteria

Not on your lists


comp(8096..8437)
DNA (342bp) protein (114aa)
50S ribosomal protein L22 id=4954186 bin=GWC2_Chloroflexi_49_37 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWC2_Chloroflexi_49_37 organism_group=Chloroflexi organism_desc=Good +; Candidate for curation
rplV; 50S ribosomal protein L22; K02890 large subunit ribosomal protein L22
Tax=RIFOXYC12_FULL_Chloroflexi_59_14_curated
rifoxyd3_full_scaffold_1077_curated_19
RIFOXYC12_FULL_Chloroflexi_59_14_curated, Chloroflexi, Bacteria

Not on your lists


comp(8449..8724)
DNA (276bp) protein (92aa)
30S ribosomal protein S19 n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N3M8_ANATU
rpsS; 30S ribosomal protein S19; K02965 small subunit ribosomal protein S19
Tax=RIFOXYC12_FULL_Chloroflexi_59_14_curated
rifoxyd3_full_scaffold_1077_curated_20
RIFOXYD12_FULL_Chloroflexi_57_15_curated, Chloroflexi, Bacteria

Not on your lists


comp(8747..9091)
DNA (345bp) protein (115aa)
50S ribosomal protein L2 n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N3M7_ANATU
rplB; 50S ribosomal protein L2; K02886 large subunit ribosomal protein L2
Tax=RIFOXYD12_FULL_Chloroflexi_57_15_curated
rifoxyd3_full_scaffold_1077_curated_21
RIFOXYD12_FULL_Chloroflexi_57_15_curated, Chloroflexi, Bacteria

Not on your lists


comp(9583..9885)
DNA (303bp) protein (101aa)
50S ribosomal protein L23 id=4954183 bin=GWC2_Chloroflexi_49_37 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWC2_Chloroflexi_49_37 organism_group=Chloroflexi organism_desc=Good +; Candidate for curation
rplW; 50S ribosomal protein L23; K02892 large subunit ribosomal protein L23
Tax=RIFOXYD12_FULL_Chloroflexi_57_15_curated
rifoxyd3_full_scaffold_1077_curated_22
RIFOXYD12_FULL_Chloroflexi_57_15_curated, Chloroflexi, Bacteria

Not on your lists


comp(9896..10528)
DNA (633bp) protein (211aa)
50S ribosomal protein L4 id=2182520 bin=GWB2_Chloroflexi_49_20 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
rplD; 50S ribosomal protein L4; K02926 large subunit ribosomal protein L4
Tax=RIFOXYD12_FULL_Chloroflexi_57_15_curated
rifoxyd3_full_scaffold_1077_curated_23
RIFOXYD12_FULL_Chloroflexi_57_15_curated, Chloroflexi, Bacteria

Not on your lists


comp(10548..11177)
DNA (630bp) protein (210aa)
50S ribosomal protein L3 id=4954181 bin=GWC2_Chloroflexi_49_37 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWC2_Chloroflexi_49_37 organism_group=Chloroflexi organism_desc=Good +; Candidate for curation rbh
rplC; 50S ribosomal protein L3; K02906 large subunit ribosomal protein L3 rbh
Tax=RIFOXYD12_FULL_Chloroflexi_57_15_curated
rifoxyd3_full_scaffold_1077_curated_24
RifOxyB12_full_Anaerolinea_60_12_curated, Anaerolineae, Chloroflexi, Bacteria

Not on your lists


comp(11407..11715)
DNA (309bp) protein (103aa)
30S ribosomal protein S10 n=1 Tax=uncultured bacterium RepID=K2D6V1_9BACT
rpsJ; 30S ribosomal protein S10; K02946 small subunit ribosomal protein S10
Tax=RifOxyB12_full_Anaerolinea_60_12_curated
rifoxyd3_full_scaffold_1077_curated_25
RIFOXYD12_FULL_Chloroflexi_57_15_curated, Chloroflexi, Bacteria

Not on your lists

comp(11723..11902)
DNA (180bp) protein (60aa)
Elongation factor Tu n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N3M2_ANATU
tufA; elongation factor Tu; K02358 elongation factor Tu
Tax=RIFOXYD12_FULL_Chloroflexi_57_15_curated
Displaying 25 items

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