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RIFOXYD1_FULL_CP_56_27_rifoxyd1_full_scaffold_1475

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Displaying 14 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFOXYD1_FULL_CP_56_27_rifoxyd1_full_scaffold_1475_1
RIFOXYD1_FULL_Proteobacteria_56_27_curated, Proteobacteria, Bacteria

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2..112
DNA (111bp) protein (37aa)
Tax=RIFOXYD1_FULL_Proteobacteria_56_27_curated
RIFOXYD1_FULL_CP_56_27_rifoxyd1_full_scaffold_1475_2
RIFOXYD1_FULL_Proteobacteria_56_27_curated, Proteobacteria, Bacteria

Not on your lists

109..696
DNA (588bp) protein (196aa)
Maf-like protein Sinac_2597 n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DC01_SINAD
MAF protein Tax=RIFOXYD1_FULL_Proteobacteria_56_27_curated
maf protein
RIFOXYD1_FULL_CP_56_27_rifoxyd1_full_scaffold_1475_3
RIFOXYD1_FULL_Proteobacteria_56_27_curated, Proteobacteria, Bacteria

Not on your lists

693..1271
DNA (579bp) protein (193aa)
Putative NAD(P)H oxidoreductase n=1 Tax=Methanothermobacter thermautotrophicus CaT2 RepID=T2GHP1_METTF
NADH dehydrogenase Tax=RIFOXYD1_FULL_Proteobacteria_56_27_curated
NADH dehydrogenase
RIFOXYD1_FULL_CP_56_27_rifoxyd1_full_scaffold_1475_4
RIFOXYD1_FULL_Proteobacteria_56_27_curated, Proteobacteria, Bacteria

Not on your lists

1327..1938
DNA (612bp) protein (204aa)
Putative membrane protein n=1 Tax=Lyngbya sp. (strain PCC 8106) RepID=A0YRA9_LYNSP
multiple antibiotic transporter Tax=RIFOXYD1_FULL_Proteobacteria_56_27_curated
multiple antibiotic transporter
RIFOXYD1_FULL_CP_56_27_rifoxyd1_full_scaffold_1475_5
RIFOXYD1_FULL_Proteobacteria_56_27_curated, Proteobacteria, Bacteria

Not on your lists


comp(1979..4615)
DNA (2637bp) protein (879aa)
alanyl-tRNA synthetase; K01872 alanyl-tRNA synthetase [EC:6.1.1.7] Tax=RIFOXYD1_FULL_Proteobacteria_56_27_curated
Alanine--tRNA ligase n=1 Tax=Flexistipes sinusarabici (strain DSM 4947 / MAS 10) RepID=F8E8T1_FLESM
alanyl-tRNA synthetase
RIFOXYD1_FULL_CP_56_27_rifoxyd1_full_scaffold_1475_6
RIFOXYD1_FULL_Proteobacteria_56_27_curated, Proteobacteria, Bacteria

Not on your lists

4725..5282
DNA (558bp) protein (186aa)
D-alpha,beta-D-heptose 1,7-bisphosphate phosphatase; K03273 D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] Tax=RIFOXYD1_FULL_Proteobacteria_56_27_curated
D,D-heptose 1,7-bisphosphate phosphatase n=1 Tax=Thermovirga lienii (strain ATCC BAA-1197 / DSM 17291 / Cas60314) RepID=G7V5Q6_THELD
D-alpha,beta-D-heptose 1,7-bisphosphate phosphatase
RIFOXYD1_FULL_CP_56_27_rifoxyd1_full_scaffold_1475_7
RIFOXYD1_FULL_Proteobacteria_56_27_curated, Proteobacteria, Bacteria

Not on your lists

5410..5934
DNA (525bp) protein (175aa)
peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family Tax=RIFOXYD1_FULL_Proteobacteria_56_27_curated
Peptidyl-prolyl cis-trans isomerase id=2728015 bin=GWF1_Xanthomonadales_69_6 species=Rhodanobacter sp. 115 genus=Rhodanobacter taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
peptidylprolyl isomerase
RIFOXYD1_FULL_CP_56_27_rifoxyd1_full_scaffold_1475_8
RIFOXYD1_FULL_Proteobacteria_56_27_curated, Proteobacteria, Bacteria

Not on your lists

5939..6805
DNA (867bp) protein (289aa)
rhomboid family protein Tax=RIFOXYD1_FULL_Proteobacteria_56_27_curated
rhomboid family protein id=14431019 bin=bin3_NC10 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=bin3_NC10 organism_group=NC10
rhomboid family protein
RIFOXYD1_FULL_CP_56_27_rifoxyd1_full_scaffold_1475_9
RIFOXYD1_FULL_Proteobacteria_56_27_curated, Proteobacteria, Bacteria

Not on your lists

comp(6808..9942)
DNA (3135bp) protein (1045aa)
hypothetical protein n=1 Tax=Fischerella muscicola RepID=UPI00031686EB
Hpt sensor hybrid histidine kinase Tax=RIFOXYD1_FULL_Proteobacteria_56_27_curated
Hpt sensor hybrid histidine kinase
RIFOXYD1_FULL_CP_56_27_rifoxyd1_full_scaffold_1475_10
RIFOXYD1_FULL_Proteobacteria_56_27_curated, Proteobacteria, Bacteria

Not on your lists

comp(10036..10758)
DNA (723bp) protein (241aa)
RNA methyltransferase; K02533 tRNA/rRNA methyltransferase [EC:2.1.1.-] Tax=RIFOXYD1_FULL_Proteobacteria_56_27_curated
RNA methyltransferase, TrmH family, group 1 id=2001112 bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
RNA methyltransferase
RIFOXYD1_FULL_CP_56_27_rifoxyd1_full_scaffold_1475_11
RIFOXYD1_FULL_Proteobacteria_56_27_curated, Proteobacteria, Bacteria

Not on your lists

comp(10755..11702)
DNA (948bp) protein (316aa)
NAD-dependent epimerase/dehydratase; K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] Tax=RIFOXYD1_FULL_Proteobacteria_56_27_curated
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5J1J7_9PORP
NAD-dependent epimerase/dehydratase
RIFOXYD1_FULL_CP_56_27_rifoxyd1_full_scaffold_1475_12
RIFOXYD1_FULL_Proteobacteria_56_27_curated, Proteobacteria, Bacteria

Not on your lists

comp(11706..13070)
DNA (1365bp) protein (455aa)
UDP-glucose 6-dehydrogenase; K00012 UDPglucose 6-dehydrogenase [EC:1.1.1.22] Tax=RIFOXYD1_FULL_Proteobacteria_56_27_curated
Nucleotide sugar dehydrogenase n=1 Tax=Pandoraea sp. SD6-2 RepID=R7X6A7_9BURK
UDP-glucose 6-dehydrogenase
RIFOXYD1_FULL_CP_56_27_rifoxyd1_full_scaffold_1475_13
RIFOXYD1_FULL_Proteobacteria_56_27_curated, Proteobacteria, Bacteria

Not on your lists

comp(13105..13698)
DNA (594bp) protein (198aa)
clpP; ATP-dependent Clp protease proteolytic subunit; K01358 ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] Tax=RIFOXYD1_FULL_Proteobacteria_56_27_curated
ATP-dependent Clp protease ClpP n=1 Tax=SAR324 cluster bacterium SCGC AAA001-C10 RepID=UPI000287AD61
clpP; ATP-dependent Clp protease proteolytic subunit
RIFOXYD1_FULL_CP_56_27_rifoxyd1_full_scaffold_1475_14
RIFOXYD1_FULL_Proteobacteria_56_27_curated, Proteobacteria, Bacteria

Not on your lists

13916..14515
DNA (600bp) protein (200aa)
Tax=RIFOXYD1_FULL_Proteobacteria_56_27_curated
Displaying 14 items

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