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RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_326

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Displaying items 1-30 of 100 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_326_1
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

3..1229
DNA (1227bp) protein (409aa)
Queuine tRNA-ribosyltransferase n=1 Tax=uncultured bacterium RepID=K1XEM9_9BACT
tRNA-guanine transglycosylase Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
tRNA-guanine transglycosylase
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_326_2
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

1304..2026
DNA (723bp) protein (241aa)
id=5801551 Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
id=5801551 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_326_3
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

2428..3480
DNA (1053bp) protein (351aa)
RNA-directed DNA polymerase Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
RNA-directed DNA polymerase (reverse transcriptase) id=2794 bin=ACD11 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=ACD11 organism_group=OD1-i organism_desc=OD1-i
RNA-directed DNA polymerase Reverse transcriptase
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_326_4
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

3490..4107
DNA (618bp) protein (206aa)
manganese/iron superoxide dismutase (EC:1.15.1.1); K04564 superoxide dismutase, Fe-Mn family [EC:1.15.1.1] Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
manganese/iron superoxide dismutase (EC:1.15.1.1)
Superoxide dismutase n=1 Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KQT8_ARCVS
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_326_5
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

4323..4919
DNA (597bp) protein (199aa)
Repressor in ring oxydation complex/phenylacetic acid degradation pathway related protein (PaaX) n=1 Tax=uncultured bacterium RepID=K2EC03_9BACT
Repressor in ring oxydation complex/phenylacetic acid degradation pathway related protein (PaaX) Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_326_6
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

5021..5983
DNA (963bp) protein (321aa)
UDP-N-acetylenolpyruvoylglucosamine reductase (EC:1.1.1.158); K00075 UDP-N-acetylmuramate dehydrogenase [EC:1.1.1.158] Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
UDP-N-acetylenolpyruvoylglucosamine reductase (EC:1.1.1.158)
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=uncultured bacterium RepID=K2F459_9BACT
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_326_7
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

6014..6397
DNA (384bp) protein (128aa)
Sigma 54 modulation protein/ribosomal protein S30EA Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
Sigma 54 modulation protein/ribosomal protein S30EA id=2598220 bin=GWC1_OD1_38_17 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_326_8
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

6351..8873
DNA (2523bp) protein (841aa)
secA; Preprotein translocase subunit SecA; K03070 preprotein translocase subunit SecA Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
Protein translocase subunit SecA id=4242122 bin=GWC2_OD1_43_27 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
secA; Preprotein translocase subunit SecA
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_326_9
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

9034..9297
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MCY7_9FIRM
hypothetical protein Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
hypothetical protein
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_326_10
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

9287..9586
DNA (300bp) protein (100aa)
Helix-turn-helix domain protein n=1 Tax=Desulfotomaculum kuznetsovii DSM 6115 RepID=F6CJP9_9FIRM id=23714 bin=ACD22 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=ACD22 organism_group=WWE3 organism_desc=WWE3
transcriptional regulator Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
transcriptional regulator
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_326_11
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

10084..11217
DNA (1134bp) protein (378aa)
DNA-directed DNA polymerase (EC:2.7.7.7); K02346 DNA polymerase IV [EC:2.7.7.7] Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
DNA-directed DNA polymerase (EC:2.7.7.7)
DNA polymerase IV n=1 Tax=uncultured bacterium RepID=K1X0Y6_9BACT
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_326_12
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

11221..12126
DNA (906bp) protein (302aa)
transporter Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
transporter id=71865 bin=ACD50 species=ACD50 genus=ACD50 taxon_order=ACD50 taxon_class=ACD50 phylum=OP11 tax=ACD50 organism_group=OP11 (Microgenomates) organism_desc=OP11
transporter
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_326_13
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

12132..12434
DNA (303bp) protein (101aa)
hypothetical protein Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
Putative uncharacterized protein id=2598226 bin=GWC1_OD1_38_17 species=unknown genus=Methanocaldococcus taxon_order=Methanococcales taxon_class=Methanococci phylum=Euryarchaeota tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
hypothetical protein
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_326_14
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

12497..12772
DNA (276bp) protein (92aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00037A37D7
hypothetical protein Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_326_15
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

12827..13393
DNA (567bp) protein (189aa)
hypothetical protein Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
Putative uncharacterized protein id=3688777 bin=PER_GWC2_41_7 species=Desulfomicrobium baculatum genus=Desulfomicrobium taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
hypothetical protein
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_326_16
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

13407..13859
DNA (453bp) protein (151aa)
nudt1, MGC69217, mth1; nudix (nucleoside diphosphate linked moiety X)-type motif 1; K03574 7,8-dihydro-8-oxoguanine triphosphatase [EC:3.6.1.-] Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
hypothetical protein id=5801887 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
short-chain dehydrogenase/reductase SDR
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_326_17
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

13863..14354
DNA (492bp) protein (164aa)
Putative uncharacterized protein n=2 Tax=delta proteobacterium MLMS-1 RepID=Q1NKT9_9DELT id=83979 bin=ACD56 species=delta proteobacterium MLMS-1 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=ACD56 organism_group=OD1-i organism_desc=OD1-i
phosphodiesterase; K07095 Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
phosphodiesterase
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_326_18
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

14554..15975
DNA (1422bp) protein (474aa)
protein-export membrane protein SecD; K03072 preprotein translocase subunit SecD Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
Preprotein translocase subunit SecD id=3152090 bin=GWC1_OD1_38_17 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
protein-export membrane protein SecD
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_326_19
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

16096..16983
DNA (888bp) protein (296aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00036E408C
protein-export membrane protein SecF; K03074 preprotein translocase subunit SecF Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
protein-export membrane protein SecF
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_326_20
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

17015..18055
DNA (1041bp) protein (347aa)
hypothetical protein Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
RNA polymerase sigma factor id=2607520 bin=GWC1_OD1_38_17 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
hypothetical protein
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_326_21
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

18295..19023
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EJ03_9BACT
hypothetical protein Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
hypothetical protein
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_326_22
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

19017..19313
DNA (297bp) protein (99aa)
hypothetical protein Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
hypothetical protein id=3163 bin=ACD11 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=ACD11 organism_group=OD1-i organism_desc=OD1-i
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_326_23
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

19317..19541
DNA (225bp) protein (75aa)
Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_326_24
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

19546..20931
DNA (1386bp) protein (462aa)
id=3501719 Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
id=3501719 bin=GWA1_ZB2_49_26 species=candidate division TM7 single-cell isolate TM7c genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_326_25
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

21000..21374
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2FBR9_9BACT
hypothetical protein Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
GxxExxY protein
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_326_26
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

21442..23403
DNA (1962bp) protein (654aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1YKC5_9BACT
hypothetical protein Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
hypothetical protein
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_326_27
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

23442..25154
DNA (1713bp) protein (571aa)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7Q002_9BACT
Uncharacterized protein Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_326_28
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

25233..26363
DNA (1131bp) protein (377aa)
Uncharacterized protein n=1 Tax=planctomycete KSU-1 RepID=I3IHQ8_9PLAN
filamentation induced by cAMP protein fic Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
filamentation induced by cAMP protein fic
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_326_29
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

26397..26498
DNA (102bp) protein (34aa)
Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_326_30
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

26503..28212
DNA (1710bp) protein (570aa)
hypothetical protein Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
hypothetical protein id=53519 bin=ACD41 species=ACD41 genus=ACD41 taxon_order=ACD41 taxon_class=ACD41 phylum=OD1 tax=ACD41 organism_group=OD1 (Parcubacteria) organism_desc=OD1
Displaying items 1-30 of 100 in total

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