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RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_1337

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_1337_1
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(3..155)
DNA (153bp) protein (51aa)
proS; prolyl-tRNA synthetase (EC:6.1.1.15) Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
UniRef90_UPI0000E87D9B prolyl-tRNA synthetase n=1 Tax=Methylophilales bacterium HTCC2181 RepID=UPI0000E87D9B id=75803 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_1337_2
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(174..1934)
DNA (1761bp) protein (587aa)
seg Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
seg id=5227013 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_1337_3
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(1996..2268)
DNA (273bp) protein (91aa)
Transcriptional regulator, ArsR family Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
Transcriptional regulator, ArsR family id=4649096 bin=GWA2_OP3_52_12 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=ACD58 tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_1337_4
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(2281..2748)
DNA (468bp) protein (156aa)
Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_1337_5
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(2753..3652)
DNA (900bp) protein (300aa)
hypothetical protein Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
hypothetical protein id=5024932 bin=GWA2_CPR4_42_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_CPR4_42_17 organism_group=CPR4 organism_desc=from megabin
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_1337_6
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(3754..4869)
DNA (1116bp) protein (372aa)
membrane-associated zinc metalloprotease; K01417 [EC:3.4.24.-] Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000361B477
membrane-associated zinc metalloprotease
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_1337_7
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(4947..5504)
DNA (558bp) protein (186aa)
ribosome recycling factor; K02838 ribosome recycling factor Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
Ribosome-recycling factor id=3423043 bin=GWA1_ZB2_49_26 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
ribosome recycling factor
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_1337_8
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(5509..6267)
DNA (759bp) protein (253aa)
dnaX2; DNA polymerase III gamma/tau subunit DnaX2; K02341 DNA polymerase III subunit delta' [EC:2.7.7.7] Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
dnaX2; DNA polymerase III gamma/tau subunit DnaX2 (EC:2.7.7.7)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI0003616D88
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_1337_9
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(6269..7276)
DNA (1008bp) protein (336aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000370B3FC
MreB/Mrl family cell shape determining protein; K03569 rod shape-determining protein MreB and related proteins Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
MreB/Mrl family cell shape determining protein
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_1337_10
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(7280..8569)
DNA (1290bp) protein (430aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7) Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase id=3423046 bin=GWA1_ZB2_49_26 species=ACD5 genus=ACD5 taxon_order=ACD5 taxon_class=ACD5 phylum=OD1 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_1337_11
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(8604..9413)
DNA (810bp) protein (270aa)
id=3501603 Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
id=3501603 bin=GWA1_ZB2_49_26 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_1337_12
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

9492..10283
DNA (792bp) protein (264aa)
Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_1337_13
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

11244..12554
DNA (1311bp) protein (437aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI0003798341
hypothetical protein Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_1337_14
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(12615..13277)
DNA (663bp) protein (221aa)
hypothetical protein, partial n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000380BD1E
hypothetical protein Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
hypothetical protein
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_1337_15
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(13368..14534)
DNA (1167bp) protein (389aa)
Phosphoribosylformylglycinamidine cyclo-ligase n=1 Tax=Staphylococcus warneri L37603 RepID=C4W905_STAWA id=3258 bin=ACD11 species=Staphylococcus warneri genus=Staphylococcus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=ACD11 organism_group=OD1-i organism_desc=OD1-i
Phosphoribosylformylglycinamidine cyclo-ligase Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_1337_16
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists


comp(14741..15343)
DNA (603bp) protein (201aa)
30S ribosomal protein S9; K02996 small subunit ribosomal protein S9 Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
30S ribosomal protein S9 id=3013137 bin=GWC1_OD1_38_17 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
30S ribosomal protein S9
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_1337_17
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists


comp(15346..15708)
DNA (363bp) protein (121aa)
50S ribosomal protein L13 n=1 Tax=Desulfurobacterium thermolithotrophum (strain DSM 11699 / BSA) RepID=F0S115_DESTD
50S ribosomal protein L13; K02871 large subunit ribosomal protein L13 Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
50S ribosomal protein L13
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_1337_18
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists


comp(15710..15907)
DNA (198bp) protein (66aa)
rplQ; 50S ribosomal protein L17; K02879 large subunit ribosomal protein L17 Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
50S ribosomal protein L17 id=3013131 bin=GWC1_OD1_38_17 species=Desulfurispirillum indicum genus=Desulfurispirillum taxon_order=Chrysiogenales taxon_class=Chrysiogenetes phylum=Chrysiogenetes tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
rplQ; 50S ribosomal protein L17
Displaying 18 items

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