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RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_145

Search features with annotation key words

Displaying items 1-30 of 131 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_145_1
RifOxyA12_full_OD1_Moranbacteria_35_19_curated, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

329..493
DNA (165bp) protein (55aa)
Type I restriction-modification system methyltransferase subunit Tax=RifOxyA12_full_OD1_Moranbacteria_35_19_curated
Type I restriction-modification system methyltransferase subunit id=2603558 bin=GWB1_Berkelbacteria_38_5 species=unknown genus=Dehalobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB1_Berkelbacteria_38_5 organism_group=ACD58 (Berkelbacteria)
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_145_2
RifOxyA12_full_OD1_Moranbacteria_35_19_curated, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

497..832
DNA (336bp) protein (112aa)
hypothetical protein Tax=RifOxyA12_full_OD1_Moranbacteria_35_19_curated
Uncharacterized protein id=2603555 bin=GWB1_Berkelbacteria_38_5 species=Prevotella sp. MSX73 genus=Prevotella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWB1_Berkelbacteria_38_5 organism_group=ACD58 (Berkelbacteria)
hypothetical protein
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_145_3
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

1050..1223
DNA (174bp) protein (58aa)
Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_145_4
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

1421..1948
DNA (528bp) protein (176aa)
Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_145_5
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

2242..2514
DNA (273bp) protein (91aa)
seg Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
seg id=5095167 bin=PER_GWF2_33_10 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=PER_GWF2_33_10 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_145_6
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

2511..2942
DNA (432bp) protein (144aa)
toxin-antitoxin system; K07341 death on curing protein Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
death on curing protein; K07341 death on curing protein id=5095166 bin=PER_GWF2_33_10 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=PER_GWF2_33_10 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
toxin-antitoxin system
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_145_7
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

2959..3276
DNA (318bp) protein (106aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI000380EF31
hypothetical protein Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_145_8
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(3361..3576)
DNA (216bp) protein (72aa)
Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_145_9
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

3692..4576
DNA (885bp) protein (295aa)
Beta-mannanase n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8LVM3_CLOCD
beta-mannanase Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
beta-mannanase
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_145_10
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

4712..5782
DNA (1071bp) protein (357aa)
Putative endoglucanase n=1 Tax=Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) RepID=A5CUI6_CLAM3
putative endoglucanase Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
putative endoglucanase
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_145_11
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(5854..7245)
DNA (1392bp) protein (464aa)
Polysaccharide deacetylase n=1 Tax=Arthrobacter chlorophenolicus (strain A6 / ATCC 700700 / DSM 12829 / JCM 12360) RepID=B8HDP2_ARTCA
polysaccharide deacetylase Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
polysaccharide deacetylase
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_145_12
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(7250..7531)
DNA (282bp) protein (94aa)
Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_145_13
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(7536..8549)
DNA (1014bp) protein (338aa)
Family 2 glycosyl transferase n=1 Tax=Candidatus Nitrosopumilus koreensis AR1 RepID=K0B3Y0_9ARCH
family 2 glycosyl transferase Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
Chitin synthase
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_145_14
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(8609..8833)
DNA (225bp) protein (75aa)
Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_145_15
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(8838..9470)
DNA (633bp) protein (211aa)
RelA/SpoT protein n=1 Tax=uncultured bacterium RepID=K2ESD1_9BACT
Hypothetical protein of RelA/SpoT family Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
hypothetical protein
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_145_16
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

9635..10462
DNA (828bp) protein (276aa)
Putative uncharacterized protein n=1 Tax=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) RepID=A3DM13_STAMF
hypothetical protein Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
hypothetical protein
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_145_17
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

10646..12157
DNA (1512bp) protein (504aa)
Uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PX97_9BACT
transposase (IS66) Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
transposase (IS66)
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_145_18
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(12997..13170)
DNA (174bp) protein (58aa)
Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_145_19
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

13613..15265
DNA (1653bp) protein (551aa)
Putative membrane-anchored cell surface protein n=3 Tax=Burkholderia glumae RepID=C5AM66_BURGB
putative membrane-anchored cell surface protein Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
putative membrane-anchored cell surface protein
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_145_20
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

15347..18496
DNA (3150bp) protein (1050aa)
caaA2; trimeric autotransporter adhesin Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
Uncharacterized protein id=1747632 bin=GWE2_CPR3_35_7 species=ACD50 genus=ACD50 taxon_order=ACD50 taxon_class=ACD50 phylum=OP11 tax=GWE2_CPR3_35_7 organism_group=CPR3 organism_desc=Good
caaA2; trimeric autotransporter adhesin
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_145_21
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

18532..19296
DNA (765bp) protein (255aa)
id=4838864 Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
id=4838864 bin=GWC2_OD1_43_27 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_145_22
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

19301..20221
DNA (921bp) protein (307aa)
Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_145_23
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

20248..20925
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2G9Y8_9BACT
two component transcriptional regulator, winged helix family; K07665 two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_c
two component transcriptional regulator, winged helix family
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_145_24
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(20912..22096)
DNA (1185bp) protein (395aa)
NarL family signal transduction histidine kinase Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
PAS/PAC sensor signal transduction histidine kinase id=15190409 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
NarL family signal transduction histidine kinase
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_145_25
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(22170..23330)
DNA (1161bp) protein (387aa)
multi-sensor hybrid histidine kinase Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
Multi-sensor hybrid histidine kinase id=2588584 bin=GWF2_Lentisphaerae_50_93 species=unknown genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
multi-sensor hybrid histidine kinase
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_145_26
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

23586..24788
DNA (1203bp) protein (401aa)
two-component hybrid sensor and regulator (EC:2.7.3.-) id=84175 bin=ACD56 species=ACD56 genus=ACD56 taxon_order=ACD56 taxon_class=ACD56 phylum=OD1-i tax=ACD56 organism_group=OD1-i organism_desc=OD1-i
integral membrane sensor signal transduction histidine kinase Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
integral membrane sensor signal transduction histidine kinase
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_145_27
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

24824..26170
DNA (1347bp) protein (449aa)
23S rRNA m(2)A-2503 methyltransferase (EC:2.1.1.-) Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
23S rRNA m(2)A-2503 methyltransferase (EC:2.1.1.-)
23S rRNA m(2)A-2503 methyltransferase n=8 Tax=root RepID=D4ML37_9FIRM
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_145_28
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(26208..26600)
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=Arthrobacter sp. 131MFCol6.1 RepID=UPI000364411E
lactoylglutathione lyase family protein; K06996 Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
lactoylglutathione lyase family protein
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_145_29
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

26831..28123
DNA (1293bp) protein (431aa)
hypothetical protein Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
hypothetical protein id=17004971 bin=RBG_16_Aminicenantes_63_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_16_Aminicenantes_63_14 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
hypothetical protein
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_145_30
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

28212..28430
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2FVN7_9BACT
hypothetical protein; K09131 hypothetical protein Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
hypothetical protein
Displaying items 1-30 of 131 in total

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