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RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_1033

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_1033_1
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(86..991)
DNA (906bp) protein (302aa)
glycoside hydrolase family 3 domain-containing protein; K01207 beta-N-acetylhexosaminidase [EC:3.2.1.52] Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
Glycoside hydrolase family 3 domain protein n=1 Tax=Methanoplanus limicola DSM 2279 RepID=H1YZH0_9EURY
glycoside hydrolase family 3 domain-containing protein
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_1033_2
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(1033..1440)
DNA (408bp) protein (136aa)
glycosyl hydrolase; K01207 beta-N-acetylhexosaminidase [EC:3.2.1.52] Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
Glycosyl hydrolase, family 3 n=1 Tax=Chlorobium tepidum (strain ATCC 49652 / DSM 12025 / TLS) RepID=Q8KG78_CHLTE
glycosyl hydrolase
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_1033_3
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(1451..2443)
DNA (993bp) protein (331aa)
Putative uncharacterized protein n=1 Tax=Candidatus Parvarchaeum acidophilus ARMAN-5 RepID=D6GVL5_9EURY id=9394 bin=ACD15 species=Candidatus Parvarchaeum acidophilus genus=Candidatus Parvarchaeum taxon_order=unknown taxon_class=unknown phylum=Euryarchaeota tax=ACD15 organism_group=OD1-i organism_desc=OD1-i
hypothetical protein
Putative uncharacterized protein Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_1033_4
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(2654..3358)
DNA (705bp) protein (235aa)
rsuA; pseudouridine synthase (EC:4.2.1.70); K06182 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21] Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
Pseudouridine synthase n=1 Tax=uncultured bacterium RepID=K2F426_9BACT
23S rRNA pseudouridine synthase F
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_1033_5
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

3541..5865
DNA (2325bp) protein (775aa)
recG; RecG-like DNA helicase; K03655 ATP-dependent DNA helicase RecG [EC:3.6.4.12] Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
id=5227314 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
recG; recG-like DNA helicase
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_1033_6
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(5893..6234)
DNA (342bp) protein (114aa)
hypothetical protein n=1 Tax=Alicyclobacillus pohliae RepID=UPI000380C0DE
hypothetical protein Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_1033_7
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(6239..6421)
DNA (183bp) protein (61aa)
Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_1033_8
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(6506..7810)
DNA (1305bp) protein (435aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI0003644BB0
conserved membrane protein of unknown function Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
conserved membrane protein of unknown function
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_1033_9
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists


8203..9354
DNA (1152bp) protein (384aa)
O-sialoglycoprotein endopeptidase (EC:3.4.24.57); K01409 O-sialoglycoprotein endopeptidase [EC:3.4.24.57] Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
O-sialoglycoprotein endopeptidase (EC:3.4.24.57)
hypothetical protein, partial n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI0003806E59
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_1033_10
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists


9381..11495
DNA (2115bp) protein (705aa)
valS; Valyl-tRNA synthetase (EC:6.1.1.9) Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
Valyl-tRNA synthetase id=3486328 bin=GWA1_ZB2_49_26 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
valyl-tRNA synthetase
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_1033_11
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

11483..12220
DNA (738bp) protein (246aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI0003801EA9
hypothetical protein Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
peptidase
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_1033_12
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

12227..12652
DNA (426bp) protein (142aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000365D230
hypothetical protein; K13993 HSP20 family protein Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
hypothetical protein
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_1033_13
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

12662..13051
DNA (390bp) protein (130aa)
hypothetical protein n=1 Tax=Candidatus Latescibacter anaerobius SCGC AAA252-E07 RepID=UPI0003B50A80
hypothetical protein Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
GK17030 gene product from transcript GK17030-RA
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_1033_14
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(13048..13218)
DNA (171bp) protein (57aa)
Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_1033_15
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

13566..14315
DNA (750bp) protein (250aa)
SMC domain-containing protein n=1 Tax=Halorubrum californiensis DSM 19288 RepID=M0E0X4_9EURY
SMC domain-containing protein Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_1033_16
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(14391..15371)
DNA (981bp) protein (327aa)
Toxin-antitoxin system, toxin component, Fic family n=1 Tax=Turicibacter sp. PC909 RepID=D4W3B3_9FIRM id=67242 bin=ACD48 species=Turicibacter sanguinis genus=Turicibacter taxon_order=Erysipelotrichales taxon_class=Erysipelotrichia phylum=Firmicutes tax=ACD48 organism_group=OP11 (Microgenomates) organism_desc=OP11
fic; FIC domain-containing protein Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
Filamentation induced by cAMP protein Fic
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_1033_17
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

15648..16259
DNA (612bp) protein (204aa)
Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_1033_18
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(16350..16688)
DNA (339bp) protein (113aa)
Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_1033_19
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(16726..17025)
DNA (300bp) protein (100aa)
Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_1033_20
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(17036..17356)
DNA (321bp) protein (107aa)
Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_1033_21
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(17415..17768)
DNA (354bp) protein (118aa)
membrane protein of unknown function Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
hypothetical protein cdivTM_30108 id=1921027 bin=GWE2_OD1_46_68 species=GWE2_OD1_46_68 genus=GWE2_OD1_46_68 taxon_order=GWE2_OD1_46_68 taxon_class=GWE2_OD1_46_68 phylum=OD1 tax=GWE2_OD1_46_68 organism_group=OD1 (Parcubacteria)
membrane protein of unknown function
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_1033_22
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(17814..18077)
DNA (264bp) protein (88aa)
Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_1033_23
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists


comp(18102..21821)
DNA (3720bp) protein (1240aa)
DNA gyrase subunit A (EC:5.99.1.3); K02469 DNA gyrase subunit A [EC:5.99.1.3] Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
DNA gyrase subunit A (EC:5.99.1.3)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000370AD49
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_1033_24
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(21830..22345)
DNA (516bp) protein (172aa)
Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_1033_25
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(22435..23094)
DNA (660bp) protein (220aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00035D7336
Zn-dependent hydrolase Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
Zn-dependent hydrolase of the beta-lactamase fold-like protein
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_1033_26
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

23229..23510
DNA (282bp) protein (94aa)
Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_1033_27
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

23724..24260
DNA (537bp) protein (179aa)
Repressor in ring oxydation complex/phenylacetic acid degradation pathway related protein (PaaX) n=1 Tax=uncultured bacterium RepID=K2EYU1_9BACT
PaaX family transcrtiptional regulator Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
PaaX family transcrtiptional regulator
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_1033_28
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

24459..25553
DNA (1095bp) protein (365aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00035F1D7D
rpfA; 30S ribosomal protein S1 Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
rpfA; 30S ribosomal protein S1
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_1033_29
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

25668..27812
DNA (2145bp) protein (715aa)
Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_1033_30
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

27818..28030
DNA (213bp) protein (71aa)
Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
Displaying items 1-30 of 39 in total

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