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RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_1547

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_1547_1
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

1..192
DNA (192bp) protein (64aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00037089BB
helix-turn-helix domain-containing protein Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
helix-turn-helix domain-containing protein
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_1547_2
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

197..502
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PVG7_9BACT
hypothetical protein Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
hypothetical protein
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_1547_3
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

519..1067
DNA (549bp) protein (183aa)
hypothetical protein Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
hypothetical protein id=2161567 bin=GWB2_Clostridiales_37_7 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Clostridiales_37_7 organism_group=Firmicute organism_desc=Good +
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_1547_4
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

1073..1372
DNA (300bp) protein (100aa)
id=4838912 Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
id=4838912 bin=GWC2_OD1_43_27 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_1547_5
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

1378..1866
DNA (489bp) protein (163aa)
hypothetical protein Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
hypothetical protein id=5096698 bin=PER_GWF2_39_17 species=PER_GWF2_39_17 genus=PER_GWF2_39_17 taxon_order=PER_GWF2_39_17 taxon_class=PER_GWF2_39_17 phylum=PER tax=PER_GWF2_39_17 organism_group=PER (Peregrinibacteria)
MazG domain protein
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_1547_6
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(2063..2647)
DNA (585bp) protein (195aa)
Resolvase domain Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
Resolvase domain id=4985833 bin=GWA2_Elusimicrobia_56_46 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_1547_7
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(2653..3543)
DNA (891bp) protein (297aa)
resolvase domain-containing protein Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
resolvase domain-containing protein id=22668 bin=ACD22 species=ACD22 genus=ACD22 taxon_order=ACD22 taxon_class=ACD22 phylum=WWE3 tax=ACD22 organism_group=WWE3 organism_desc=WWE3
recombinase
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_1547_8
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(3548..4591)
DNA (1044bp) protein (348aa)
Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_1547_9
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(4986..5414)
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=candidate division WWE3 bacterium RAAC2_WWE3_1 RepID=V5RTL0_9BACT
hypothetical protein
Uncharacterized protein Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_1547_10
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(5386..5691)
DNA (306bp) protein (102aa)
hypothetical protein Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
hypothetical protein
hypothetical protein; K06412 stage V sporulation protein G id=725780 bin=RAAC2_WWE3 species=RAAC2_WWE3 genus=RAAC2_WWE3 taxon_order=RAAC2_WWE3 taxon_class=RAAC2_WWE3 phylum=WWE3 tax=RAAC2_WWE3 organism_group=WWE3
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_1547_11
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(6185..6370)
DNA (186bp) protein (62aa)
Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_1547_12
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(6384..6773)
DNA (390bp) protein (130aa)
DNA mismatch endonuclease Vsr; K07458 DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-] Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
DNA mismatch endonuclease Vsr; K07458 DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-] id=130638 bin=ACD7 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=ACD7 organism_group=OD1-i organism_desc=OD1-i
DNA mismatch endonuclease Vsr
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_1547_13
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(6763..7533)
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2FKA6_9BACT
hypothetical protein Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
hypothetical protein
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_1547_14
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(7538..8578)
DNA (1041bp) protein (347aa)
Cytosine-specific methyltransferase n=1 Tax=Cyanobacterium stanieri (strain ATCC 29140 / PCC 7202) RepID=K9YLC1_CYASC
DNA-cytosine methyltransferase Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
DNA-cytosine methyltransferase
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_1547_15
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(8694..9182)
DNA (489bp) protein (163aa)
Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_1547_16
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(9298..9888)
DNA (591bp) protein (197aa)
id=2803723 Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
id=2803723 bin=GWB1_KAZAN_52_7 species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=GWB1_KAZAN_52_7 organism_group=Kazan
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_1547_17
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(9893..10915)
DNA (1023bp) protein (341aa)
hypothetical protein Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
hypothetical protein id=2987 bin=ACD11 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=ACD11 organism_group=OD1-i organism_desc=OD1-i
hypothetical protein
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_1547_18
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(10948..11880)
DNA (933bp) protein (311aa)
Filamentation induced by cAMP protein Fic n=1 Tax=uncultured bacterium RepID=K1XG22_9BACT
filamentation induced by cAMP protein fic Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
filamentation induced by cAMP protein fic
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_1547_19
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

11976..12692
DNA (717bp) protein (239aa)
id=1899232 Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
id=1899232 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_1547_20
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

12689..13129
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Fusobacterium varium ATCC 27725 RepID=C6JPC0_FUSVA
hypothetical protein Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
hypothetical protein
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_1547_21
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(13167..13640)
DNA (474bp) protein (158aa)
transposase Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
transposase id=15189510 bin=GWE1_Berkelbacteria_39_12 species=PER_GWE2_38_7 genus=PER_GWE2_38_7 taxon_order=PER_GWE2_38_7 taxon_class=PER_GWE2_38_7 phylum=PER tax=GWE1_Berkelbacteria_39_12 organism_group=ACD58 (Berkelbacteria) organism_desc=Complete genome (ACD58 lineage)
transposase
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_1547_22
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(13787..14356)
DNA (570bp) protein (190aa)
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase; K01243 S-adenosylhomocysteine/5'-methylthioadenosine nucleosidase [EC:3.2.2.9] Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
MTA/SAH nucleosidase n=1 Tax=Leptotrichia goodfellowii F0264 RepID=D0GNE1_9FUSO
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
Displaying 22 items

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