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RIFOXYD1_FULL_OP11_38_12_complete

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Displaying items 1-30 of 1201 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFOXYD1_FULL_OP11_38_12_complete_1
RIFOXYB2_FULL_OP11_Roizmanbacteria_38_10_curated, Roizmannbacteria, Microgenomates, Bacteria

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1..3768
DNA (3768bp) protein (1256aa)
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium RepID=K2EVU9_9BACT rbh
negative regulator of genetic competence clpC/mecB; K03696 ATP-dependent Clp protease ATP-binding subunit ClpC rbh
Tax=RIFOXYB2_FULL_OP11_Roizmanbacteria_38_10_curated
RIFOXYD1_FULL_OP11_38_12_complete_2
RIFOXYB2_FULL_OP11_Roizmanbacteria_38_10_curated, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

3777..3959
DNA (183bp) protein (61aa)
Tax=RIFOXYB2_FULL_OP11_Roizmanbacteria_38_10_curated
RIFOXYD1_FULL_OP11_38_12_complete_3
RIFOXYB2_FULL_OP11_Roizmanbacteria_38_10_curated, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

3949..4632
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2CY93_9BACT
Tax=RIFOXYB2_FULL_OP11_Roizmanbacteria_38_10_curated
RIFOXYD1_FULL_OP11_38_12_complete_4
RIFOXYB2_FULL_OP11_Roizmanbacteria_38_10_curated, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

4629..4946
DNA (318bp) protein (106aa)
id=5085424 bin=GWA2_OP11_43_14 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWA2_OP11_43_14 organism_group=OP11 (Microgenomates) organism_desc=GWA2_OP11_2
Tax=RIFOXYB2_FULL_OP11_Roizmanbacteria_38_10_curated
RIFOXYD1_FULL_OP11_38_12_complete_5
RIFOXYB2_FULL_OP11_Roizmanbacteria_38_10_curated, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

5097..6419
DNA (1323bp) protein (441aa)
pyrH; uridylate kinase (EC:2.7.4.-); K09903 uridylate kinase [EC:2.7.4.22]
hypothetical protein n=1 Tax=Candidatus Microgenomatus auricola SCGC AAA011-E14 RepID=UPI0003646EB5
Tax=RIFOXYB2_FULL_OP11_Roizmanbacteria_38_10_curated
RIFOXYD1_FULL_OP11_38_12_complete_6
RIFOXYB2_FULL_OP11_Roizmanbacteria_38_10_curated, Roizmannbacteria, Microgenomates, Bacteria

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6442..7476
DNA (1035bp) protein (345aa)
DNA replication and repair protein recF n=1 Tax=uncultured candidate division WWE3 bacterium EJ0ADIGA11YD11 RepID=B0KVC4_9BACT id=3843 bin=ACD12 species=uncultured candidate division WWE3 bacterium EJ0ADIGA11YD11 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11 rbh
recF; DNA replication and repair protein RecF; K03629 DNA replication and repair protein RecF
Tax=RIFOXYB2_FULL_OP11_Roizmanbacteria_38_10_curated
RIFOXYD1_FULL_OP11_38_12_complete_7
RIFOXYB2_FULL_OP11_Roizmanbacteria_38_10_curated, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

7697..8095
DNA (399bp) protein (133aa)
putative DNA-binding protein with PD1-like DNA-binding motif id=18248053 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
putative DNA-binding protein with PD1-like DNA-binding motif
Tax=RIFOXYB2_FULL_OP11_Roizmanbacteria_38_10_curated
RIFOXYD1_FULL_OP11_38_12_complete_8
RIFOXYB2_FULL_OP11_Roizmanbacteria_38_10_curated, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

8107..8778
DNA (672bp) protein (224aa)
Tax=RIFOXYB2_FULL_OP11_Roizmanbacteria_38_10_curated
RIFOXYD1_FULL_OP11_38_12_complete_9
RIFOXYB2_FULL_OP11_Roizmanbacteria_38_10_curated, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

8818..9411
DNA (594bp) protein (198aa)
hypothetical protein n=1 Tax=Fluoribacter dumoffii RepID=UPI00026C812D
hypothetical protein
Tax=RIFOXYB2_FULL_OP11_Roizmanbacteria_38_10_curated
RIFOXYD1_FULL_OP11_38_12_complete_10
RIFOXYB2_FULL_OP11_Roizmanbacteria_38_10_curated, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

9473..10309
DNA (837bp) protein (279aa)
hypothetical protein id=5085067 bin=GWA2_OP11_43_14 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWA2_OP11_43_14 organism_group=OP11 (Microgenomates) organism_desc=GWA2_OP11_2
hypothetical protein
Tax=RIFOXYB2_FULL_OP11_Roizmanbacteria_38_10_curated
RIFOXYD1_FULL_OP11_38_12_complete_11
RIFOXYB2_FULL_OP11_Roizmanbacteria_38_10_curated, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

comp(10337..11737)
DNA (1401bp) protein (467aa)
hypothetical protein id=5084127 bin=GWA2_OP11_43_14 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWA2_OP11_43_14 organism_group=OP11 (Microgenomates) organism_desc=GWA2_OP11_2
Tax=RIFOXYB2_FULL_OP11_Roizmanbacteria_38_10_curated
RIFOXYD1_FULL_OP11_38_12_complete_12
RIFOXYB2_FULL_OP11_Roizmanbacteria_38_10_curated, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

11921..13246
DNA (1326bp) protein (442aa)
Uncharacterized protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EFQ1_9CHLR
CBS domain-containing protein
Tax=RIFOXYB2_FULL_OP11_Roizmanbacteria_38_10_curated
RIFOXYD1_FULL_OP11_38_12_complete_13
RIFOXYB2_FULL_OP11_Roizmanbacteria_38_10_curated, Roizmannbacteria, Microgenomates, Bacteria

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13308..13865
DNA (558bp) protein (186aa)
Rubrerythrin id=4320223 bin=GWF2_CPR3_35_18 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWF2_CPR3_35_18 organism_group=CPR3
rubrerythrin
Tax=RIFOXYB2_FULL_OP11_Roizmanbacteria_38_10_curated
RIFOXYD1_FULL_OP11_38_12_complete_14
RIFOXYB2_FULL_OP11_Roizmanbacteria_38_10_curated, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

13942..14412
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2AAS3_9BACT
Tax=RIFOXYB2_FULL_OP11_Roizmanbacteria_38_10_curated
RIFOXYD1_FULL_OP11_38_12_complete_15
RIFOXYB2_FULL_OP11_Roizmanbacteria_38_10_curated, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

14431..15252
DNA (822bp) protein (274aa)
HhH-GPD; K03575 A/G-specific adenine glycosylase [EC:3.2.2.-] id=96812 bin=ACD64 species=ACD64 genus=ACD64 taxon_order=ACD64 taxon_class=ACD64 phylum=TM6 tax=ACD64 organism_group=TM6 organism_desc=unknown
A/G-specific DNA glycosylase (EC:3.2.2.-)
Tax=RIFOXYB2_FULL_OP11_Roizmanbacteria_38_10_curated
RIFOXYD1_FULL_OP11_38_12_complete_16
RIFOXYB2_FULL_OP11_Roizmanbacteria_38_10_curated, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

15287..15880
DNA (594bp) protein (198aa)
DNA-(apurinic or apyrimidinic site) lyase/endonuclease III (EC:3.2.2.- 4.2.99.18); K10773 endonuclease III [EC:4.2.99.18] id=84042 bin=ACD56 species=ACD56 genus=ACD56 taxon_order=ACD56 taxon_class=ACD56 phylum=OD1-i tax=ACD56 organism_group=OD1-i organism_desc=OD1-i
endonuclease III ; K10773 endonuclease III [EC:4.2.99.18]
Tax=RIFOXYB2_FULL_OP11_Roizmanbacteria_38_10_curated
RIFOXYD1_FULL_OP11_38_12_complete_17
RIFOXYB2_FULL_OP11_Roizmanbacteria_38_10_curated, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

comp(15867..17105)
DNA (1239bp) protein (413aa)
nucleotidyltransferase/DNA polymerase protein; K02346 DNA polymerase IV [EC:2.7.7.7] rbh
DNA polymerase IV id=4528789 bin=GWC2_Nitrospirae-rel_56_14 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA rbh
Tax=RIFOXYB2_FULL_OP11_Roizmanbacteria_38_10_curated
RIFOXYD1_FULL_OP11_38_12_complete_18
RIFOXYB2_FULL_OP11_Roizmanbacteria_38_10_curated, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

comp(17111..17683)
DNA (573bp) protein (191aa)
DNA polymerase V subunit; K03503 DNA polymerase V [EC:3.4.21.-]
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2FSA2_9BACT
Tax=RIFOXYB2_FULL_OP11_Roizmanbacteria_38_10_curated
RIFOXYD1_FULL_OP11_38_12_complete_19
RIFOXYB2_FULL_OP11_Roizmanbacteria_38_10_curated, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

comp(17830..18480)
DNA (651bp) protein (217aa)
Metallo-dependent phosphatases id=3842 bin=ACD12 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11
Tax=RIFOXYB2_FULL_OP11_Roizmanbacteria_38_10_curated
RIFOXYD1_FULL_OP11_38_12_complete_20
RIFOXYB2_FULL_OP11_Roizmanbacteria_38_10_curated, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

comp(18487..20580)
DNA (2094bp) protein (698aa)
Elongation factor G n=1 Tax=uncultured bacterium RepID=K2EU36_9BACT rbh
translation elongation factor G; K02355 elongation factor G rbh
Tax=RIFOXYB2_FULL_OP11_Roizmanbacteria_38_10_curated
RIFOXYD1_FULL_OP11_38_12_complete_21
RIFOXYB2_FULL_OP11_Roizmanbacteria_38_10_curated, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists


comp(20685..21158)
DNA (474bp) protein (158aa)
30S ribosomal protein S7 n=1 Tax=uncultured bacterium RepID=K2EW90_9BACT
30S ribosomal protein S7; K02992 small subunit ribosomal protein S7
Tax=RIFOXYB2_FULL_OP11_Roizmanbacteria_38_10_curated
RIFOXYD1_FULL_OP11_38_12_complete_22
RIFOXYB2_FULL_OP11_Roizmanbacteria_38_10_curated, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists


comp(21184..21615)
DNA (432bp) protein (144aa)
Ribosomal protein S12 n=1 Tax=Filifactor alocis ATCC 35896 RepID=D6GR10_9FIRM id=3849 bin=ACD12 species=Filifactor alocis genus=Filifactor taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11
30S ribosomal protein S12; K02950 small subunit ribosomal protein S12
Tax=RIFOXYB2_FULL_OP11_Roizmanbacteria_38_10_curated
RIFOXYD1_FULL_OP11_38_12_complete_23
RIFOXYB2_FULL_OP11_Roizmanbacteria_38_10_curated, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

comp(21566..25357)
DNA (3792bp) protein (1264aa)
ace:Acel_0300 DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6); K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] id=3845 bin=ACD12 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11 rbh
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6); K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] rbh
Tax=RIFOXYB2_FULL_OP11_Roizmanbacteria_38_10_curated
RIFOXYD1_FULL_OP11_38_12_complete_24
RIFOXYB2_FULL_OP11_Roizmanbacteria_38_10_curated, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

comp(25363..28578)
DNA (3216bp) protein (1072aa)
tjr:TherJR_0288 DNA-directed RNA polymerase, beta subunit (EC:2.7.7.6); K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] id=3844 bin=ACD12 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11 rbh
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6); K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] rbh
Tax=RIFOXYB2_FULL_OP11_Roizmanbacteria_38_10_curated
RIFOXYD1_FULL_OP11_38_12_complete_25
RIFOXYB2_FULL_OP11_Roizmanbacteria_38_10_curated, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

comp(28680..28961)
DNA (282bp) protein (94aa)
Tax=RIFOXYB2_FULL_OP11_Roizmanbacteria_38_10_curated
RIFOXYD1_FULL_OP11_38_12_complete_26
RIFOXYB2_FULL_OP11_Roizmanbacteria_38_10_curated, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

comp(28945..29208)
DNA (264bp) protein (88aa)
Tax=RIFOXYB2_FULL_OP11_Roizmanbacteria_38_10_curated
RIFOXYD1_FULL_OP11_38_12_complete_27
RIFOXYB2_FULL_OP11_Roizmanbacteria_38_10_curated, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

comp(29224..29961)
DNA (738bp) protein (246aa)
nucleotidyltransferase; K00973 glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2AAK0_9BACT rbh
Tax=RIFOXYB2_FULL_OP11_Roizmanbacteria_38_10_curated
RIFOXYD1_FULL_OP11_38_12_complete_28
RIFOXYB2_FULL_OP11_Roizmanbacteria_38_10_curated, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

comp(29966..30247)
DNA (282bp) protein (94aa)
transmembrane_regions 20..37 id=5019 bin=ACD12 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11
Tax=RIFOXYB2_FULL_OP11_Roizmanbacteria_38_10_curated
RIFOXYD1_FULL_OP11_38_12_complete_29
RIFOXYB2_FULL_OP11_Roizmanbacteria_38_10_curated, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

comp(30255..31136)
DNA (882bp) protein (294aa)
hypothetical protein id=23327 bin=ACD22 species=ACD22 genus=ACD22 taxon_order=ACD22 taxon_class=ACD22 phylum=WWE3 tax=ACD22 organism_group=WWE3 organism_desc=WWE3
hypothetical protein
Tax=RIFOXYB2_FULL_OP11_Roizmanbacteria_38_10_curated
RIFOXYD1_FULL_OP11_38_12_complete_30
RIFOXYB2_FULL_OP11_Roizmanbacteria_38_10_curated, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

comp(31133..31531)
DNA (399bp) protein (133aa)
acetobutylicum phosphotransbutyrylase id=67030 bin=ACD48 species=ACD48 genus=ACD48 taxon_order=ACD48 taxon_class=ACD48 phylum=OP11 tax=ACD48 organism_group=OP11 (Microgenomates) organism_desc=OP11
VanZ family protein
Tax=RIFOXYB2_FULL_OP11_Roizmanbacteria_38_10_curated
Displaying items 1-30 of 1201 in total

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