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RIFOXYD2_FULL_Elusimicrobia_34_30_rifoxyd2_full_scaffold_3239

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFOXYD2_FULL_Elusimicrobia_34_30_rifoxyd2_full_scaffold_3239_1
RIFOXYD2_FULL_Elusimicrobia_34_30_curated, Elusimicrobia, Bacteria

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1..1236
DNA (1236bp) protein (412aa)
RNA methyltransferase, TrmA family (EC:2.1.1.35); K03215 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] Tax=RIFOXYD2_FULL_Elusimicrobia_34_30_curated
RNA methyltransferase, TrmA family (EC:2.1.1.35)
RNA methyltransferase, TrmA family n=1 Tax=Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288) RepID=D9QT42_ACEAZ
RIFOXYD2_FULL_Elusimicrobia_34_30_rifoxyd2_full_scaffold_3239_2
RIFOXYD2_FULL_Elusimicrobia_34_30_curated, Elusimicrobia, Bacteria

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1420..4362
DNA (2943bp) protein (981aa)
transcription-repair coupling factor Mfd ; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-] Tax=RIFOXYD2_FULL_Elusimicrobia_34_30_curated
Transcription-repair-coupling factor n=1 Tax=Uncultured termite group 1 bacterium phylotype Rs-D17 RepID=B1H078_UNCTG
transcription-repair coupling factor Mfd
RIFOXYD2_FULL_Elusimicrobia_34_30_rifoxyd2_full_scaffold_3239_3
RIFOXYD2_FULL_Elusimicrobia_34_30_curated, Elusimicrobia, Bacteria

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4393..5304
DNA (912bp) protein (304aa)
Peptidylprolyl cis-trans isomerase lipoprotein, PpiC-type n=2 Tax=Geobacter metallireducens RepID=Q39PS1_GEOMG
PpiC-type peptidyl-prolyl cis-trans isomerase Tax=RIFOXYD2_FULL_Elusimicrobia_34_30_curated
peptidylprolyl cis-trans isomerase lipoprotein, PpiC-type
RIFOXYD2_FULL_Elusimicrobia_34_30_rifoxyd2_full_scaffold_3239_4
RIFOXYD2_FULL_Elusimicrobia_34_30_curated, Elusimicrobia, Bacteria

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5294..6340
DNA (1047bp) protein (349aa)
PpiC-type peptidyl-prolyl cis-trans isomerase; K03769 peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] Tax=RIFOXYD2_FULL_Elusimicrobia_34_30_curated
PpiC-type peptidyl-prolyl cis-trans isomerase id=2291554 bin=GWA2_Elusimicrobia_56_46 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
PpiC-type peptidyl-prolyl cis-trans isomerase
RIFOXYD2_FULL_Elusimicrobia_34_30_rifoxyd2_full_scaffold_3239_5
RIFOXYD2_FULL_Elusimicrobia_34_30_curated, Elusimicrobia, Bacteria

Not on your lists

6343..7200
DNA (858bp) protein (286aa)
4-hydroxythreonine-4-phosphate dehydrogenase (EC:1.1.1.262); K00097 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262] Tax=RIFOXYD2_FULL_Elusimicrobia_34_30_curated
4-hydroxythreonine-4-phosphate dehydrogenase (EC:1.1.1.262)
4-hydroxythreonine-4-phosphate dehydrogenase id=3773924 bin=GWF2_OP3_38_59 species=Emticicia oligotrophica genus=Emticicia taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
RIFOXYD2_FULL_Elusimicrobia_34_30_rifoxyd2_full_scaffold_3239_6
RIFOXYD2_FULL_Elusimicrobia_34_30_curated, Elusimicrobia, Bacteria

Not on your lists

7209..7802
DNA (594bp) protein (198aa)
HNH endonuclease n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XRB4_9BACT
mcrA; Restriction endonuclease, McrA/HNH family Tax=RIFOXYD2_FULL_Elusimicrobia_34_30_curated
HNH endonuclease
RIFOXYD2_FULL_Elusimicrobia_34_30_rifoxyd2_full_scaffold_3239_7
RIFOXYD2_FULL_Elusimicrobia_34_30_curated, Elusimicrobia, Bacteria

Not on your lists


7799..8563
DNA (765bp) protein (255aa)
ksgA; dimethyladenosine transferase (EC:2.1.1.-); K02528 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] Tax=RIFOXYD2_FULL_Elusimicrobia_34_30_curated
ksgA; dimethyladenosine transferase (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase A n=1 Tax=Thermobrachium celere DSM 8682 RepID=R7RLZ9_9CLOT
RIFOXYD2_FULL_Elusimicrobia_34_30_rifoxyd2_full_scaffold_3239_8
RIFOXYD2_FULL_Elusimicrobia_34_30_curated, Elusimicrobia, Bacteria

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comp(8506..9300)
DNA (795bp) protein (265aa)
prepilin peptidase; K02654 leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] Tax=RIFOXYD2_FULL_Elusimicrobia_34_30_curated
prepilin peptidase (EC:3.4.23.43)
Type 4 prepilin-like proteins leader peptide-processing enzyme n=1 Tax=Hippea maritima (strain ATCC 700847 / DSM 10411 / MH2) RepID=F2LUZ6_HIPMA
RIFOXYD2_FULL_Elusimicrobia_34_30_rifoxyd2_full_scaffold_3239_9
RIFOXYD2_FULL_Elusimicrobia_34_30_curated, Elusimicrobia, Bacteria

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comp(9624..10115)
DNA (492bp) protein (164aa)
hypothetical protein Tax=RIFOXYD2_FULL_Elusimicrobia_34_30_curated
Putative uncharacterized protein id=2187993 bin=GWA2_Elusimicrobia_56_46 species=Ilyobacter polytropus genus=Ilyobacter taxon_order=Fusobacteriales taxon_class=Fusobacteriia phylum=Fusobacteria tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
hypothetical protein
RIFOXYD2_FULL_Elusimicrobia_34_30_rifoxyd2_full_scaffold_3239_10
RIFOXYD2_FULL_Elusimicrobia_34_30_curated, Elusimicrobia, Bacteria

Not on your lists

comp(10213..10575)
DNA (363bp) protein (121aa)
type II secretion system F domain-containing protein; K02653 type IV pilus assembly protein PilC Tax=RIFOXYD2_FULL_Elusimicrobia_34_30_curated
Probable type 4 fimbrial assembly protein (PilC) id=4349249 bin=GWA2_Elusimicrobia_56_46 species=Desulfotalea psychrophila genus=Desulfotalea taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
type II secretion system F domain-containing protein
Displaying 10 items

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