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RIFOXYD2_FULL_Proteobacteria_related_56_26_rifoxyd2_full_scaffold_259

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Displaying 26 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFOXYD2_FULL_Proteobacteria_related_56_26_rifoxyd2_full_scaffold_259_1
RIFOXYD1_FULL_Proteobacteria_56_27_curated, Proteobacteria, Bacteria

Not on your lists

comp(697..1239)
DNA (543bp) protein (181aa)
Tax=RIFOXYD1_FULL_Proteobacteria_56_27_curated
RIFOXYD2_FULL_Proteobacteria_related_56_26_rifoxyd2_full_scaffold_259_2
RIFOXYD1_FULL_Proteobacteria_56_27_curated, Proteobacteria, Bacteria

Not on your lists

comp(1462..2379)
DNA (918bp) protein (306aa)
Tax=RIFOXYD1_FULL_Proteobacteria_56_27_curated
RIFOXYD2_FULL_Proteobacteria_related_56_26_rifoxyd2_full_scaffold_259_3
RIFOXYD1_FULL_Proteobacteria_56_27_curated, Proteobacteria, Bacteria

Not on your lists

comp(2367..4010)
DNA (1644bp) protein (548aa)
Tax=RIFOXYD1_FULL_Proteobacteria_56_27_curated
RIFOXYD2_FULL_Proteobacteria_related_56_26_rifoxyd2_full_scaffold_259_4
RIFOXYD1_FULL_Proteobacteria_56_27_curated, Proteobacteria, Bacteria

Not on your lists

4398..5465
DNA (1068bp) protein (356aa)
CDP-glucose 4,6-dehydratase; K01709 CDP-glucose 4,6-dehydratase [EC:4.2.1.45] Tax=RIFOXYD1_FULL_Proteobacteria_56_27_curated
rfbG; CDP-glucose 4,6-dehydratase (EC:4.2.1.45)
CDP-glucose 4,6-dehydratase id=2115597 bin=GWB2_Geobacter-like_52_12 species=unknown genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB2_Geobacter-like_52_12 organism_group=Deltaproteobacteria organism_desc=Good
RIFOXYD2_FULL_Proteobacteria_related_56_26_rifoxyd2_full_scaffold_259_5
RIFOXYD1_FULL_Proteobacteria_56_27_curated, Proteobacteria, Bacteria

Not on your lists

5466..5978
DNA (513bp) protein (171aa)
dTDP-4-dehydrorhamnose 35-epimerase-like protein (EC:5.1.3.13); K01790 dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] Tax=RIFOXYD1_FULL_Proteobacteria_56_27_curated
dTDP-4-dehydrorhamnose 35-epimerase-like protein (EC:5.1.3.13)
dTDP-4-dehydrorhamnose 3,5-epimerase-like enzyme id=2115596 bin=GWB2_Geobacter-like_52_12 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWB2_Geobacter-like_52_12 organism_group=Deltaproteobacteria organism_desc=Good
RIFOXYD2_FULL_Proteobacteria_related_56_26_rifoxyd2_full_scaffold_259_6
RIFOXYD1_FULL_Proteobacteria_56_27_curated, Proteobacteria, Bacteria

Not on your lists

5982..6770
DNA (789bp) protein (263aa)
nucleoside-diphosphate-sugar pyrophosphorylase Tax=RIFOXYD1_FULL_Proteobacteria_56_27_curated
Glucose-1-phosphate cytidylyltransferase id=2266899 bin=GWA2_OP3_52_12 species=unknown genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
nucleoside-diphosphate-sugar pyrophosphorylase
RIFOXYD2_FULL_Proteobacteria_related_56_26_rifoxyd2_full_scaffold_259_7
RIFOXYD1_FULL_Proteobacteria_56_27_curated, Proteobacteria, Bacteria

Not on your lists

6767..7717
DNA (951bp) protein (317aa)
nucleoside-diphosphate-sugar epimerase; K01784 UDP-glucose 4-epimerase [EC:5.1.3.2] Tax=RIFOXYD1_FULL_Proteobacteria_56_27_curated
Nucleoside-diphosphate-sugar epimerase n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2WB49_MAGSA
nucleoside-diphosphate-sugar epimerase
RIFOXYD2_FULL_Proteobacteria_related_56_26_rifoxyd2_full_scaffold_259_8
RIFOXYD1_FULL_Proteobacteria_56_27_curated, Proteobacteria, Bacteria

Not on your lists

7719..8606
DNA (888bp) protein (296aa)
Glycosyltransferase n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2WB46_MAGSA
glycosyltransferase Tax=RIFOXYD1_FULL_Proteobacteria_56_27_curated
glycosyltransferase
RIFOXYD2_FULL_Proteobacteria_related_56_26_rifoxyd2_full_scaffold_259_9
RIFOXYD1_FULL_Proteobacteria_56_27_curated, Proteobacteria, Bacteria

Not on your lists

comp(8640..9542)
DNA (903bp) protein (301aa)
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75); K00791 tRNA dimethylallyltransferase [EC:2.5.1.75] Tax=RIFOXYD1_FULL_Proteobacteria_56_27_curated
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75)
tRNA dimethylallyltransferase 1 n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=MIAA1_GEODF
RIFOXYD2_FULL_Proteobacteria_related_56_26_rifoxyd2_full_scaffold_259_10
RIFOXYD1_FULL_Proteobacteria_56_27_curated, Proteobacteria, Bacteria

Not on your lists

comp(9565..9987)
DNA (423bp) protein (141aa)
Putative uncharacterized protein n=1 Tax=Beggiatoa sp. PS RepID=A7C3E8_9GAMM
hypothetical protein Tax=RIFOXYD1_FULL_Proteobacteria_56_27_curated
hypothetical protein
RIFOXYD2_FULL_Proteobacteria_related_56_26_rifoxyd2_full_scaffold_259_11
RIFOXYD1_FULL_Proteobacteria_56_27_curated, Proteobacteria, Bacteria

Not on your lists

comp(9984..12935)
DNA (2952bp) protein (984aa)
Tax=RIFOXYD1_FULL_Proteobacteria_56_27_curated
RIFOXYD2_FULL_Proteobacteria_related_56_26_rifoxyd2_full_scaffold_259_12
RIFOXYD1_FULL_Proteobacteria_56_27_curated, Proteobacteria, Bacteria

Not on your lists

13083..13691
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AGF0_IGNAJ
Putative protein-S-isoprenylcysteine methyltransferase Tax=RIFOXYD1_FULL_Proteobacteria_56_27_curated
protein-S-isoprenylcysteine methyltransferase
RIFOXYD2_FULL_Proteobacteria_related_56_26_rifoxyd2_full_scaffold_259_13
RIFOXYD1_FULL_Proteobacteria_56_27_curated, Proteobacteria, Bacteria

Not on your lists

13725..14546
DNA (822bp) protein (274aa)
2-dehydro-3-deoxyphosphooctonate aldolase n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZYC5_9BACT
2-dehydro-3-deoxyphosphooctonate aldolase Tax=RIFOXYD1_FULL_Proteobacteria_56_27_curated
2-dehydro-3-deoxyphosphooctonate aldolase
RIFOXYD2_FULL_Proteobacteria_related_56_26_rifoxyd2_full_scaffold_259_14
RIFOXYD1_FULL_Proteobacteria_56_27_curated, Proteobacteria, Bacteria

Not on your lists

14548..15276
DNA (729bp) protein (243aa)
kdsB; 3-deoxy-D-manno-octulosonate cytidylyltransferase (EC:2.7.7.38); K00979 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] Tax=RIFOXYD1_FULL_Proteobacteria_56_27_
kdsB; 3-deoxy-D-manno-octulosonate cytidylyltransferase (EC:2.7.7.38)
3-deoxy-manno-octulosonate cytidylyltransferase n=1 Tax=Selenomonas sp. FOBRC9 RepID=J4V2G2_9FIRM
RIFOXYD2_FULL_Proteobacteria_related_56_26_rifoxyd2_full_scaffold_259_15
RIFOXYD1_FULL_Proteobacteria_56_27_curated, Proteobacteria, Bacteria

Not on your lists

15273..16121
DNA (849bp) protein (283aa)
tyrA; bifunctional chorismate mutase/prephenate dehydrogenase (EC:1.3.1.12 5.4.99.5); K14187 chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12] Tax=RIFOXYD1_FULL_Proteobacteria_56_27_
hypothetical protein; K04517 prephenate dehydrogenase [EC:1.3.1.12] id=5090496 bin=GWC2_PER_33_13 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWC2_PER_33_13 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
tyrA; bifunctional chorismate mutase/prephenate dehydrogenase (EC:1.3.1.12 5.4.99.5)
RIFOXYD2_FULL_Proteobacteria_related_56_26_rifoxyd2_full_scaffold_259_16
RIFOXYD1_FULL_Proteobacteria_56_27_curated, Proteobacteria, Bacteria

Not on your lists

16187..18502
DNA (2316bp) protein (772aa)
hypothetical protein n=1 Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI0002628A6A
hypothetical protein Tax=RIFOXYD1_FULL_Proteobacteria_56_27_curated
RIFOXYD2_FULL_Proteobacteria_related_56_26_rifoxyd2_full_scaffold_259_17
RIFOXYD1_FULL_Proteobacteria_56_27_curated, Proteobacteria, Bacteria

Not on your lists

18499..20196
DNA (1698bp) protein (566aa)
recJ; single-stranded-DNA-specific exonuclease RecJ (EC:3.1.-.-); K07462 single-stranded-DNA-specific exonuclease [EC:3.1.-.-] Tax=RIFOXYD1_FULL_Proteobacteria_56_27_curated
single-stranded-DNA-specific exonuclease RecJ n=1 Tax=SAR324 cluster bacterium SCGC AAA001-C10 RepID=UPI000289FF71
recJ; single-stranded DNA-specific exonuclease RecJ
RIFOXYD2_FULL_Proteobacteria_related_56_26_rifoxyd2_full_scaffold_259_18
RIFOXYD1_FULL_Proteobacteria_56_27_curated, Proteobacteria, Bacteria

Not on your lists

comp(20184..21359)
DNA (1176bp) protein (392aa)
fad dependent oxidoreductase; K15736 L-2-hydroxyglutarate oxidase [EC:1.1.3.-] Tax=RIFOXYD1_FULL_Proteobacteria_56_27_curated
FAD dependent oxidoreductase n=1 Tax=Chlorobium ferrooxidans DSM 13031 RepID=Q0YTV1_9CHLB
fad dependent oxidoreductase
RIFOXYD2_FULL_Proteobacteria_related_56_26_rifoxyd2_full_scaffold_259_19
RIFOXYD1_FULL_Proteobacteria_56_27_curated, Proteobacteria, Bacteria

Not on your lists

comp(21407..21988)
DNA (582bp) protein (194aa)
Phosphoheptose isomerase n=1 Tax=Campylobacter jejuni 32488 RepID=S5IWD4_CAMJU
phosphoheptose isomerase Tax=RIFOXYD1_FULL_Proteobacteria_56_27_curated
phosphoheptose isomerase
RIFOXYD2_FULL_Proteobacteria_related_56_26_rifoxyd2_full_scaffold_259_20
RIFOXYD1_FULL_Proteobacteria_56_27_curated, Proteobacteria, Bacteria

Not on your lists

comp(21997..22542)
DNA (546bp) protein (182aa)
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13); K01790 dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] Tax=RIFOXYD1_FULL_Proteobacteria_56_27_curated
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13)
dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJF9_9BURK
RIFOXYD2_FULL_Proteobacteria_related_56_26_rifoxyd2_full_scaffold_259_21
RIFOXYD1_FULL_Proteobacteria_56_27_curated, Proteobacteria, Bacteria

Not on your lists

22862..23647
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Caenispirillum salinarum AK4 RepID=K9GJ94_9PROT
hypothetical protein Tax=RIFOXYD1_FULL_Proteobacteria_56_27_curated
conserved protein of unknown function
RIFOXYD2_FULL_Proteobacteria_related_56_26_rifoxyd2_full_scaffold_259_22
RIFOXYD1_FULL_Proteobacteria_56_27_curated, Proteobacteria, Bacteria

Not on your lists

comp(23644..24669)
DNA (1026bp) protein (342aa)
hypothetical protein n=1 Tax=SAR324 cluster bacterium SCGC AAA001-C10 RepID=UPI000289296F
hypothetical protein; K07027 Tax=RIFOXYD1_FULL_Proteobacteria_56_27_curated
hypothetical protein
RIFOXYD2_FULL_Proteobacteria_related_56_26_rifoxyd2_full_scaffold_259_23
RIFOXYD1_FULL_Proteobacteria_56_27_curated, Proteobacteria, Bacteria

Not on your lists

comp(24669..25511)
DNA (843bp) protein (281aa)
hypothetical protein n=1 Tax=Fischerella muscicola RepID=UPI00031368AC
YdjC-like protein Tax=RIFOXYD1_FULL_Proteobacteria_56_27_curated
hopanoid biosynthesis associated protein HpnK
RIFOXYD2_FULL_Proteobacteria_related_56_26_rifoxyd2_full_scaffold_259_24
RIFOXYD1_FULL_Proteobacteria_56_27_curated, Proteobacteria, Bacteria

Not on your lists

comp(25508..26497)
DNA (990bp) protein (330aa)
Glycosyltransferase, group 2 family protein n=1 Tax=Leptospira kmetyi serovar Malaysia str. Bejo-Iso9 RepID=V6I7A2_9LEPT
family 2 glycosyl transferase Tax=RIFOXYD1_FULL_Proteobacteria_56_27_curated
glycosyltransferase
RIFOXYD2_FULL_Proteobacteria_related_56_26_rifoxyd2_full_scaffold_259_25
RIFOXYD1_FULL_Proteobacteria_56_27_curated, Proteobacteria, Bacteria

Not on your lists

comp(26506..28434)
DNA (1929bp) protein (643aa)
Tax=RIFOXYD1_FULL_Proteobacteria_56_27_curated
RIFOXYD2_FULL_Proteobacteria_related_56_26_rifoxyd2_full_scaffold_259_26
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28788..28943
DNA (156bp) protein (52aa)
Mannose-1-phosphate guanyltransferase n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U3N3_9PROT
Mannose-1-phosphate guanyltransferase {ECO:0000313|EMBL:CAM77490.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source
hypothetical protein
Displaying 26 items

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