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RIFOXYD2_FULL_CP_36_8_rifoxyd2_full_scaffold_399

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Displaying 24 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFOXYD2_FULL_CP_36_8_rifoxyd2_full_scaffold_399_1
RIFOXYB2_FULL_WOR_1_37_13_curated, WOR-1, Bacteria

Not on your lists

comp(2..367)
DNA (366bp) protein (122aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=1 Tax=Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 / DL) RepID=F6DRF8_DESRL
glucose inhibited division protein A; K03495 tRNA uridine 5-carboxymethylaminomethyl modification enzyme Tax=RIFOXYB2_FULL_WOR_1_37_13_curated
glucose inhibited division protein A
RIFOXYD2_FULL_CP_36_8_rifoxyd2_full_scaffold_399_2
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(378..1421)
DNA (1044bp) protein (348aa)
Signal transduction histidine kinase n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XP92_METZD
signal transduction histidine kinase Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
signal transduction histidine kinase
RIFOXYD2_FULL_CP_36_8_rifoxyd2_full_scaffold_399_3
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(1507..2493)
DNA (987bp) protein (329aa)
bioB; biotin synthetase (EC:2.8.1.6); K01012 biotin synthetase [EC:2.8.1.6] Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Biotin synthase (EC:2.8.1.6)
Biotin synthase id=2087116 bin=GWE2_RBX1_39_32 species=Phascolarctobacterium succinatutens genus=Phascolarctobacterium taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
RIFOXYD2_FULL_CP_36_8_rifoxyd2_full_scaffold_399_4
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

2532..3212
DNA (681bp) protein (227aa)
alpha/beta hydrolase fold protein; K02170 pimelyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85] Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Carboxylesterase BioH n=2 Tax=Neisseria weaveri RepID=G2DMK4_9NEIS
alpha/beta hydrolase fold protein
RIFOXYD2_FULL_CP_36_8_rifoxyd2_full_scaffold_399_5
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(3323..3814)
DNA (492bp) protein (164aa)
hypothetical protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
UPF0234 protein DesdiDRAFT_3264 id=1891859 bin=GWE2_RBX1_39_32 species=Desulfitobacterium dichloroeliminans genus=Desulfitobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein
RIFOXYD2_FULL_CP_36_8_rifoxyd2_full_scaffold_399_6
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

3905..6058
DNA (2154bp) protein (718aa)
UvrD/REP helicase; K03657 DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12] Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
hypothetical protein n=1 Tax=candidate division OP9 bacterium OP9-77CS RepID=UPI000364DBD7
UvrD/REP helicase
RIFOXYD2_FULL_CP_36_8_rifoxyd2_full_scaffold_399_7
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

6159..7235
DNA (1077bp) protein (359aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYD2_FULL_CP_36_8_rifoxyd2_full_scaffold_399_8
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

7324..8580
DNA (1257bp) protein (419aa)
exodeoxyribonuclease VII; K03601 exodeoxyribonuclease VII large subunit [EC:3.1.11.6] Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Exodeoxyribonuclease 7 large subunit id=3283929 bin=GWF2_OP3_38_59 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
exodeoxyribonuclease VII
RIFOXYD2_FULL_CP_36_8_rifoxyd2_full_scaffold_399_9
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

8570..8776
DNA (207bp) protein (69aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYD2_FULL_CP_36_8_rifoxyd2_full_scaffold_399_10
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(8907..9227)
DNA (321bp) protein (107aa)
DsrE family protein; K06039 uncharacterized protein involved in oxidation of intracellular sulfur Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Putative uncharacterized protein id=4954738 bin=GWC2_OP3-like_45_7 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_OP3-like_45_7 organism_group=OP3 (Omnitrophica)
hypothetical protein
RIFOXYD2_FULL_CP_36_8_rifoxyd2_full_scaffold_399_11
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(9224..9802)
DNA (579bp) protein (193aa)
methyltransferase type 11 Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
methyltransferase type 11 id=124977 bin=ACD79 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=ACD79 organism_group=Chlamydiae organism_desc=Novel, branching deeply from Chlamydiae
methyltransferase type 11
RIFOXYD2_FULL_CP_36_8_rifoxyd2_full_scaffold_399_12
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(9786..10127)
DNA (342bp) protein (114aa)
regulatory protein ArsR; K03892 ArsR family transcriptional regulator Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Regulatory protein ArsR id=1778323 bin=GWB2_Proteobacteria_55_19 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
regulatory protein ArsR
RIFOXYD2_FULL_CP_36_8_rifoxyd2_full_scaffold_399_13
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

10232..10594
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Flavobacteriales bacterium ALC-1 RepID=A8UM76_9FLAO
Uncharacterized protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYD2_FULL_CP_36_8_rifoxyd2_full_scaffold_399_14
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(10683..11690)
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XUU3_SORCE
hypothetical protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
hypothetical protein
RIFOXYD2_FULL_CP_36_8_rifoxyd2_full_scaffold_399_15
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

11973..12227
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EGE9_9BACT
Uncharacterized protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYD2_FULL_CP_36_8_rifoxyd2_full_scaffold_399_16
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

12217..12450
DNA (234bp) protein (78aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYD2_FULL_CP_36_8_rifoxyd2_full_scaffold_399_17
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

12903..13172
DNA (270bp) protein (90aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYD2_FULL_CP_36_8_rifoxyd2_full_scaffold_399_18
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

13169..13405
DNA (237bp) protein (79aa)
hypothetical protein n=1 Tax=Cloacimonetes bacterium SCGC AAA252-N05 RepID=UPI0003804B2F
hypothetical protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
hypothetical protein
RIFOXYD2_FULL_CP_36_8_rifoxyd2_full_scaffold_399_19
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

13674..15080
DNA (1407bp) protein (469aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=B3E4M5_GEOLS
Fis family two component sigma-54 specific transcriptional regulator Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Fis family two component sigma-54 specific transcriptional regulator
RIFOXYD2_FULL_CP_36_8_rifoxyd2_full_scaffold_399_20
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(15593..16336)
DNA (744bp) protein (248aa)
PROKAR_LIPOPROTEIN Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
PROKAR_LIPOPROTEIN id=5097295 bin=PER_GWF2_39_17 species=PER_GWF2_39_17 genus=PER_GWF2_39_17 taxon_order=PER_GWF2_39_17 taxon_class=PER_GWF2_39_17 phylum=PER tax=PER_GWF2_39_17 organism_group=PER (Peregrinibacteria)
RIFOXYD2_FULL_CP_36_8_rifoxyd2_full_scaffold_399_21
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(16441..17214)
DNA (774bp) protein (258aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYD2_FULL_CP_36_8_rifoxyd2_full_scaffold_399_22
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(17281..18522)
DNA (1242bp) protein (414aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYD2_FULL_CP_36_8_rifoxyd2_full_scaffold_399_23
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(18581..19333)
DNA (753bp) protein (251aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYD2_FULL_CP_36_8_rifoxyd2_full_scaffold_399_24
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

19938..20993
DNA (1056bp) protein (352aa)
beta-galactosidase (EC:3.2.1.23)
Beta-galactosidase n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=F1T992_9CLOT
beta-galactosidase Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Displaying 24 items

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