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RIFOXYD2_FULL_CP_36_8_rifoxyd2_full_scaffold_806

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Displaying 24 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFOXYD2_FULL_CP_36_8_rifoxyd2_full_scaffold_806_1
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

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3..254
DNA (252bp) protein (84aa)
signal recognition particle protein id=4749013 bin=GWC2_Bacteroidetes_40_13 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_40_13 organism_group=Bacteroidetes
signal recognition protein; K03106 signal recognition particle subunit SRP54 Tax=GWE2_Bacteroidetes_40_63_curated
signal recognition particle protein
RIFOXYD2_FULL_CP_36_8_rifoxyd2_full_scaffold_806_2
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

677..931
DNA (255bp) protein (85aa)
hypothetical protein n=1 Tax=Anaeromusa acidaminophila RepID=UPI00037608B0
radical SAM protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
radical SAM protein
RIFOXYD2_FULL_CP_36_8_rifoxyd2_full_scaffold_806_3
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

910..1224
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1) RepID=F4LW04_TEPAE
hypothetical protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
hypothetical protein
RIFOXYD2_FULL_CP_36_8_rifoxyd2_full_scaffold_806_4
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

1289..3874
DNA (2586bp) protein (862aa)
Hemolysin-type calcium-binding repeat family protein n=1 Tax=Lyngbya aestuarii BL J RepID=U7QGM1_9CYAN
hypothetical protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
hypothetical protein
RIFOXYD2_FULL_CP_36_8_rifoxyd2_full_scaffold_806_5
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(3998..4288)
DNA (291bp) protein (97aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYD2_FULL_CP_36_8_rifoxyd2_full_scaffold_806_6
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

4519..5442
DNA (924bp) protein (308aa)
Peptidase, M23/M37 family n=1 Tax=Deferribacter desulfuricans (strain DSM 14783 / JCM 11476 / NBRC 101012 / SSM1) RepID=D3PAU0_DEFDS
peptidase M23/M37 family Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
peptidase M23/M37 family
RIFOXYD2_FULL_CP_36_8_rifoxyd2_full_scaffold_806_7
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

5443..6138
DNA (696bp) protein (232aa)
uroporphyrin-III C/tetrapyrrole methyltransferase; K07056 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
hypothetical protein; K07056 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] id=1249614 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
uroporphyrin-III C/tetrapyrrole methyltransferase
RIFOXYD2_FULL_CP_36_8_rifoxyd2_full_scaffold_806_8
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

6225..8195
DNA (1971bp) protein (657aa)
TonB-dependent receptor n=1 Tax=Halanaerobium praevalens (strain ATCC 33744 / DSM 2228 / GSL) RepID=E3DRP2_HALPG
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
TonB-dependent receptor
RIFOXYD2_FULL_CP_36_8_rifoxyd2_full_scaffold_806_9
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

8267..8788
DNA (522bp) protein (174aa)
TonB family domain-containing protein n=1 Tax=Dialister succinatiphilus YIT 11850 RepID=H1CZ67_9FIRM
TonB family protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
energry transducer TonB
RIFOXYD2_FULL_CP_36_8_rifoxyd2_full_scaffold_806_10
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

8793..9014
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KNN4_9FIRM
Protein of unknown function (DUF2905) Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Protein of unknown function (DUF2905)
RIFOXYD2_FULL_CP_36_8_rifoxyd2_full_scaffold_806_11
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

9041..9268
DNA (228bp) protein (76aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYD2_FULL_CP_36_8_rifoxyd2_full_scaffold_806_12
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

9290..10351
DNA (1062bp) protein (354aa)
queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase; K07568 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:5.-.-.-] Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=1 Tax=Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NS-E) RepID=B9KB71_THENN
queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase
RIFOXYD2_FULL_CP_36_8_rifoxyd2_full_scaffold_806_13
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(10439..11389)
DNA (951bp) protein (317aa)
Uncharacterized protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Uncharacterized protein id=2044093 bin=GWE2_RBX1_39_32 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
RIFOXYD2_FULL_CP_36_8_rifoxyd2_full_scaffold_806_14
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(11386..12468)
DNA (1083bp) protein (361aa)
Class II chitinase n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MZA8_CORCM
chiD; class II chitinase Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
chiD; class II chitinase
RIFOXYD2_FULL_CP_36_8_rifoxyd2_full_scaffold_806_15
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(12733..13797)
DNA (1065bp) protein (355aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYD2_FULL_CP_36_8_rifoxyd2_full_scaffold_806_16
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

13891..15033
DNA (1143bp) protein (381aa)
tgt; queuine tRNA-ribosyltransferase; K00773 queuine tRNA-ribosyltransferase [EC:2.4.2.29] Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
queuine tRNA-ribosyltransferase n=1 Tax=[Clostridium] glycolicum RepID=UPI00035E8793
tgt; queuine tRNA-ribosyltransferase
RIFOXYD2_FULL_CP_36_8_rifoxyd2_full_scaffold_806_17
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(15034..15453)
DNA (420bp) protein (140aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYD2_FULL_CP_36_8_rifoxyd2_full_scaffold_806_18
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(15789..16652)
DNA (864bp) protein (288aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYD2_FULL_CP_36_8_rifoxyd2_full_scaffold_806_19
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

16848..18179
DNA (1332bp) protein (444aa)
SecD/SecF family protein-export membrane protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Protein translocase subunit SecD id=2012751 bin=GWE2_RBX1_39_32 species=Dethiosulfovibrio peptidovorans genus=Dethiosulfovibrio taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
SecD/SecF family protein-export membrane protein
RIFOXYD2_FULL_CP_36_8_rifoxyd2_full_scaffold_806_20
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

18176..19072
DNA (897bp) protein (299aa)
Protein-export membrane protein SecF n=1 Tax=Thermincola potens (strain JR) RepID=D5XEJ7_THEPJ
protein-export membrane protein SecF; K03074 preprotein translocase subunit SecF Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
protein-export membrane protein SecF
RIFOXYD2_FULL_CP_36_8_rifoxyd2_full_scaffold_806_21
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

19149..19949
DNA (801bp) protein (267aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYD2_FULL_CP_36_8_rifoxyd2_full_scaffold_806_22
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(19956..21143)
DNA (1188bp) protein (396aa)
MiaB-like tRNA modifying enzyme n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=Q3AF04_CARHZ
MiaB-like tRNA modifying enzyme Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
MiaB-like tRNA modifying enzyme
RIFOXYD2_FULL_CP_36_8_rifoxyd2_full_scaffold_806_23
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(21130..21882)
DNA (753bp) protein (251aa)
hypothetical protein; K09761 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) RepID=B8CXK8_HALOH
hypothetical protein
RIFOXYD2_FULL_CP_36_8_rifoxyd2_full_scaffold_806_24
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(21882..22163)
DNA (282bp) protein (94aa)
Chaperone protein DnaJ n=1 Tax=Thalassospira profundimaris WP0211 RepID=K2MD61_9PROT
chaperone protein DnaJ; K03686 molecular chaperone DnaJ Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
chaperone protein DnaJ
Displaying 24 items

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