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RIFOXYD2_FULL_CP_41_8_rifoxyd2_full_scaffold_321

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Displaying items 1-30 of 34 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFOXYD2_FULL_CP_41_8_rifoxyd2_full_scaffold_321_1
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

158..1204
DNA (1047bp) protein (349aa)
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KS28_9FIRM
adenosylmethionine-8-amino-7-oxononanoate transaminase Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
adenosylmethionine-8-amino-7-oxononanoate transaminase
RIFOXYD2_FULL_CP_41_8_rifoxyd2_full_scaffold_321_2
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

1237..1458
DNA (222bp) protein (74aa)
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase n=1 Tax=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) RepID=B0TF31_HELMI
adenosylmethionine-8-amino-7-oxononanoate transaminase Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
bioA; adenosylmethionine-8-amino-7-oxononanoate aminotransferase
RIFOXYD2_FULL_CP_41_8_rifoxyd2_full_scaffold_321_3
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(1428..2474)
DNA (1047bp) protein (349aa)
Tyrosine lyase n=1 Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=Q3A6Z0_PELCD
thiH; thiamine biosynthesis protein ThiH; K03150 thiamine biosynthesis ThiH Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
thiH-2; thiamine biosynthesis protein ThiH
RIFOXYD2_FULL_CP_41_8_rifoxyd2_full_scaffold_321_4
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(2471..3232)
DNA (762bp) protein (254aa)
thiG; thiazole synthase; K03149 thiamine biosynthesis ThiG Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Thiazole synthase id=3825156 bin=GWF2_Planctomycete_41_51 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Planctomycete_41_51 organism_group=Planctomycetes organism_desc=a211
thiG; thiazole synthase
RIFOXYD2_FULL_CP_41_8_rifoxyd2_full_scaffold_321_5
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(3486..3779)
DNA (294bp) protein (98aa)
Anaerobic ribonucleoside-triphosphate reductase Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Anaerobic ribonucleoside-triphosphate reductase id=7201121 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
RIFOXYD2_FULL_CP_41_8_rifoxyd2_full_scaffold_321_6
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(3911..4744)
DNA (834bp) protein (278aa)
4Fe-4S protein n=1 Tax=Thermoplasmatales archaeon SCGC AB-540-F20 RepID=M7U8Z0_9EURY
4Fe-4S ferredoxin Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
4Fe-4S ferredoxin
RIFOXYD2_FULL_CP_41_8_rifoxyd2_full_scaffold_321_7
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(4756..5160)
DNA (405bp) protein (135aa)
Rrf2 family transcriptional regulator n=1 Tax=Thermodesulfatator atlanticus RepID=UPI0003B6DF82
transcriptional regulator, badm/rrf2 family Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
BadM/Rrf2 family transcriptional regulator
RIFOXYD2_FULL_CP_41_8_rifoxyd2_full_scaffold_321_8
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(5378..5692)
DNA (315bp) protein (105aa)
Thioredoxin n=1 Tax=Thermincola potens (strain JR) RepID=D5X849_THEPJ
thioredoxin; K03671 thioredoxin 1 Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
thioredoxin
RIFOXYD2_FULL_CP_41_8_rifoxyd2_full_scaffold_321_9
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(5714..5806)
DNA (93bp) protein (31aa)
Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
RIFOXYD2_FULL_CP_41_8_rifoxyd2_full_scaffold_321_10
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(5854..6432)
DNA (579bp) protein (193aa)
Rubrerythrin n=1 Tax=Odoribacter sp. CAG:788 RepID=R5PGP5_9PORP
Rubrerythrin Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
rubrerythrin
RIFOXYD2_FULL_CP_41_8_rifoxyd2_full_scaffold_321_11
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(6449..6967)
DNA (519bp) protein (173aa)
hypothetical protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Putative uncharacterized protein id=2504138 bin=GWC1_CPR2_39_9 species=Archaeoglobus sulfaticallidus genus=Archaeoglobus taxon_order=Archaeoglobales taxon_class=Archaeoglobi phylum=Euryarchaeota tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
hypothetical protein
RIFOXYD2_FULL_CP_41_8_rifoxyd2_full_scaffold_321_12
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(6975..8168)
DNA (1194bp) protein (398aa)
hypothetical protein n=3 Tax=Aminicenantes RepID=UPI0003772888
flavodoxin/nitric oxide synthase Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
flavodoxin/nitric oxide synthase
RIFOXYD2_FULL_CP_41_8_rifoxyd2_full_scaffold_321_13
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(8150..8320)
DNA (171bp) protein (57aa)
Rubredoxin n=1 Tax=Thermosipho melanesiensis (strain BI429 / DSM 12029) RepID=A6LMA0_THEM4
rubredoxin-type Fe(Cys)4 protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
rubredoxin-type Fe(Cys)4 protein
RIFOXYD2_FULL_CP_41_8_rifoxyd2_full_scaffold_321_14
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(8389..8772)
DNA (384bp) protein (128aa)
desulfoferrodoxin; K05919 superoxide reductase [EC:1.15.1.2] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Desulfoferrodoxin n=1 Tax=Desulfohalobium retbaense (strain DSM 5692) RepID=C8WZG7_DESRD
desulfoferrodoxin
RIFOXYD2_FULL_CP_41_8_rifoxyd2_full_scaffold_321_15
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(8772..9197)
DNA (426bp) protein (142aa)
hypothetical protein n=2 Tax=unclassified Aminicenantes RepID=UPI000380DAC0
ferric-uptake regulator; K09825 Fur family transcriptional regulator, peroxide stress response regulator Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
ferric-uptake regulator
RIFOXYD2_FULL_CP_41_8_rifoxyd2_full_scaffold_321_16
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

9264..9794
DNA (531bp) protein (177aa)
Rubrerythrin n=1 Tax=Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1) RepID=F4LTF1_TEPAE
rubrerythrin Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Rubrerythrin
RIFOXYD2_FULL_CP_41_8_rifoxyd2_full_scaffold_321_17
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

9876..10919
DNA (1044bp) protein (348aa)
Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
RIFOXYD2_FULL_CP_41_8_rifoxyd2_full_scaffold_321_18
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(10923..11603)
DNA (681bp) protein (227aa)
putative DNA alkylation repair enzyme Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
hypothetical protein id=5102263 bin=GWF1_WS6_37_7 species=WS6_GWF1_36_7 genus=WS6_GWF1_36_7 taxon_order=WS6_GWF1_36_7 taxon_class=WS6_GWF1_36_7 phylum=WS6 tax=GWF1_WS6_37_7 organism_group=WS6 (Doikabacteria)
putative DNA alkylation repair enzyme
RIFOXYD2_FULL_CP_41_8_rifoxyd2_full_scaffold_321_19
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

11686..12177
DNA (492bp) protein (164aa)
Kef-type K+ transport system, membrane component n=1 Tax=Paenibacillus polymyxa (strain E681) RepID=E0RBF0_PAEP6
Kef-type K+ transporter membrane component; K03455 monovalent cation:H+ antiporter-2, CPA2 family Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Kef-type K+ transporter membrane component
RIFOXYD2_FULL_CP_41_8_rifoxyd2_full_scaffold_321_20
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(12115..12279)
DNA (165bp) protein (55aa)
Marine sediment metagenome DNA, contig: S06H3_S03870 Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
RIFOXYD2_FULL_CP_41_8_rifoxyd2_full_scaffold_321_21
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(12283..12798)
DNA (516bp) protein (172aa)
KilA-N, DNA-binding domain protein n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=D6SU16_9DELT
hypothetical protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
hypothetical protein
RIFOXYD2_FULL_CP_41_8_rifoxyd2_full_scaffold_321_22
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(13032..13940)
DNA (909bp) protein (303aa)
thioredoxin reductase (EC:1.8.1.9); K03387 alkyl hydroperoxide reductase subunit F [EC:1.6.4.-] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
thioredoxin reductase (EC:1.8.1.9)
Alkyl hydroperoxide reductase subunit F id=4168192 bin=GWF2_OP3_43_52 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
RIFOXYD2_FULL_CP_41_8_rifoxyd2_full_scaffold_321_23
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(14045..16159)
DNA (2115bp) protein (705aa)
pnp; polyribonucleotide nucleotidyltransferase Pnp (EC:2.7.7.8) Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
pnp; polyribonucleotide nucleotidyltransferase Pnp (EC:2.7.7.8)
Polyribonucleotide nucleotidyltransferase n=1 Tax=Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB) RepID=K4LTI9_THEPS
RIFOXYD2_FULL_CP_41_8_rifoxyd2_full_scaffold_321_24
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists


comp(16160..16429)
DNA (270bp) protein (90aa)
30S ribosomal protein S15 n=1 Tax=Geovibrio thiophilus RepID=UPI0003B3E3E1
rpsO; 30S ribosomal protein S15; K02956 small subunit ribosomal protein S15 Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
rpsO; 30S ribosomal protein S15
RIFOXYD2_FULL_CP_41_8_rifoxyd2_full_scaffold_321_25
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(16469..17359)
DNA (891bp) protein (297aa)
riboflavin biosynthesis protein RibF (EC:2.7.1.26 2.7.7.2); K11753 riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
riboflavin biosynthesis protein RibF (EC:2.7.1.26 2.7.7.2)
riboflavin biosynthesis protein RibF n=1 Tax=Thermodesulfatator atlanticus RepID=UPI0003B64A14
RIFOXYD2_FULL_CP_41_8_rifoxyd2_full_scaffold_321_26
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(17356..18174)
DNA (819bp) protein (273aa)
hypothetical protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Uncharacterized protein id=1961824 bin=GWE2_RBX1_39_32 species=Thermoanaerobacterium saccharolyticum genus=Thermoanaerobacterium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein
RIFOXYD2_FULL_CP_41_8_rifoxyd2_full_scaffold_321_27
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(18273..18920)
DNA (648bp) protein (216aa)
preQ(0) biosynthesis protein QueC Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
queuosine biosynthesis protein QueC id=7202137 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
preQ(0) biosynthesis protein QueC
RIFOXYD2_FULL_CP_41_8_rifoxyd2_full_scaffold_321_28
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

18975..20069
DNA (1095bp) protein (365aa)
Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
RIFOXYD2_FULL_CP_41_8_rifoxyd2_full_scaffold_321_29
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(20059..21336)
DNA (1278bp) protein (426aa)
adenylosuccinate synthetase (EC:6.3.4.4); K01939 adenylosuccinate synthase [EC:6.3.4.4] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
adenylosuccinate synthetase (EC:6.3.4.4)
Adenylosuccinate synthetase n=1 Tax=Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288) RepID=D9QUK3_ACEAZ
RIFOXYD2_FULL_CP_41_8_rifoxyd2_full_scaffold_321_30
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(21530..21934)
DNA (405bp) protein (135aa)
hypothetical protein
id=3001737 Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
id=3001737 bin=GWF2_OP3_43_52 species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
Displaying items 1-30 of 34 in total

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