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RIFOXYD2_FULL_CP_50_16_rifoxyd2_full_scaffold_320

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFOXYD2_FULL_CP_50_16_rifoxyd2_full_scaffold_320_1
RIFOXYD2_FULL_Proteobacteria_50_16_curated, Proteobacteria, Bacteria

Not on your lists

comp(2..775)
DNA (774bp) protein (258aa)
integral membrane protein MviN; K03980 virulence factor Tax=RIFOXYD2_FULL_Proteobacteria_50_16_curated
integral membrane protein MviN; K03980 virulence factor id=24434549 bin=RBG_19FT_COMBO_Aminicenantes_65_30 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
integral membrane protein MviN
RIFOXYD2_FULL_CP_50_16_rifoxyd2_full_scaffold_320_2
RIFOXYD2_FULL_Proteobacteria_50_16_curated, Proteobacteria, Bacteria

Not on your lists

923..2248
DNA (1326bp) protein (442aa)
Flagellar biosynthetic protein FlhF n=1 Tax=Thermincola potens (strain JR) RepID=D5XFF3_THEPJ
flagellar biosynthetic protein FlhF; K02404 flagellar biosynthesis protein FlhF Tax=RIFOXYD2_FULL_Proteobacteria_50_16_curated
flagellar biosynthetic protein FlhF
RIFOXYD2_FULL_CP_50_16_rifoxyd2_full_scaffold_320_3
RIFOXYD2_FULL_Proteobacteria_50_16_curated, Proteobacteria, Bacteria

Not on your lists

2346..3218
DNA (873bp) protein (291aa)
flagellar synthesis regulator n=1 Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI0002628B57
Cobyrinic acid ac-diamide synthase; K04562 flagellar biosynthesis protein FlhG Tax=RIFOXYD2_FULL_Proteobacteria_50_16_curated
Cobyrinic acid ac-diamide synthase
RIFOXYD2_FULL_CP_50_16_rifoxyd2_full_scaffold_320_4
RIFOXYD2_FULL_Proteobacteria_50_16_curated, Proteobacteria, Bacteria

Not on your lists

comp(3587..4273)
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Hirschia baltica (strain ATCC 49814 / DSM 5838 / IFAM 1418) RepID=C6XMI0_HIRBI
hypothetical protein Tax=RIFOXYD2_FULL_Proteobacteria_50_16_curated
hypothetical protein
RIFOXYD2_FULL_CP_50_16_rifoxyd2_full_scaffold_320_5
RIFOXYD2_FULL_Proteobacteria_50_16_curated, Proteobacteria, Bacteria

Not on your lists

comp(4273..4668)
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1ZNQ8_9BACT
hypothetical protein Tax=RIFOXYD2_FULL_Proteobacteria_50_16_curated
pilus biosynthesis protein HicB
RIFOXYD2_FULL_CP_50_16_rifoxyd2_full_scaffold_320_6
RIFOXYD2_FULL_Proteobacteria_50_16_curated, Proteobacteria, Bacteria

Not on your lists

comp(4690..4860)
DNA (171bp) protein (57aa)
Tax=RIFOXYD2_FULL_Proteobacteria_50_16_curated
RIFOXYD2_FULL_CP_50_16_rifoxyd2_full_scaffold_320_7
RIFOXYD2_FULL_Proteobacteria_50_16_curated, Proteobacteria, Bacteria

Not on your lists

comp(5382..6236)
DNA (855bp) protein (285aa)
Phenazine biosynthesis protein, PhzF family n=3 Tax=Acinetobacter baumannii RepID=K5PU45_ACIBA
putative epimerase, PhzC/PhzF-like protein Tax=RIFOXYD2_FULL_Proteobacteria_50_16_curated
putative epimerase, PhzC/PhzF-like protein
RIFOXYD2_FULL_CP_50_16_rifoxyd2_full_scaffold_320_8
RIFOXYD2_FULL_Proteobacteria_50_16_curated, Proteobacteria, Bacteria

Not on your lists

comp(6233..6964)
DNA (732bp) protein (244aa)
Glutathione S-transferase, putative n=1 Tax=Acaryochloris marina (strain MBIC 11017) RepID=B0C6Q9_ACAM1
glutathione S-transferase Tax=RIFOXYD2_FULL_Proteobacteria_50_16_curated
glutathione S-transferase
RIFOXYD2_FULL_CP_50_16_rifoxyd2_full_scaffold_320_9
RIFOXYD2_FULL_Proteobacteria_50_16_curated, Proteobacteria, Bacteria

Not on your lists

7356..7727
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Cecembia lonarensis LW9 RepID=K1L0A4_9BACT
hypothetical protein Tax=RIFOXYD2_FULL_Proteobacteria_50_16_curated
hypothetical protein
RIFOXYD2_FULL_CP_50_16_rifoxyd2_full_scaffold_320_10
RIFOXYD2_FULL_Proteobacteria_50_16_curated, Proteobacteria, Bacteria

Not on your lists


comp(7937..8494)
DNA (558bp) protein (186aa)
rplI; 50S ribosomal protein L9; K02939 large subunit ribosomal protein L9 Tax=RIFOXYD2_FULL_Proteobacteria_50_16_curated
50S ribosomal protein L9 id=2062348 bin=GWD2_Nitrospirae-related_57_8 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
50S ribosomal protein L9
RIFOXYD2_FULL_CP_50_16_rifoxyd2_full_scaffold_320_11
RIFOXYD2_FULL_Proteobacteria_50_16_curated, Proteobacteria, Bacteria

Not on your lists


comp(8498..8785)
DNA (288bp) protein (96aa)
30S ribosomal protein S18 n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=RS18_PARUW
rpsR; 30S ribosomal protein S18; K02963 small subunit ribosomal protein S18 Tax=RIFOXYD2_FULL_Proteobacteria_50_16_curated
rpsR; 30S ribosomal protein S18
RIFOXYD2_FULL_CP_50_16_rifoxyd2_full_scaffold_320_12
RIFOXYD2_FULL_Proteobacteria_50_16_curated, Proteobacteria, Bacteria

Not on your lists


comp(8787..9164)
DNA (378bp) protein (126aa)
hypothetical protein, partial n=1 Tax=SAR324 cluster bacterium SCGC AB-629-J17 RepID=UPI00036E7059
SSU ribosomal protein s6p; K02990 small subunit ribosomal protein S6 Tax=RIFOXYD2_FULL_Proteobacteria_50_16_curated
30S ribosomal protein s6
RIFOXYD2_FULL_CP_50_16_rifoxyd2_full_scaffold_320_13
RIFOXYD2_FULL_Proteobacteria_50_16_curated, Proteobacteria, Bacteria

Not on your lists

comp(9245..10336)
DNA (1092bp) protein (364aa)
hypothetical protein n=1 Tax=SAR324 cluster bacterium SCGC AAA240-J09 RepID=UPI00031A6198
ychF; GTP-dependent nucleic acid-binding protein EngD; K06942 Tax=RIFOXYD2_FULL_Proteobacteria_50_16_curated
ychF; GTP-dependent nucleic acid-binding protein EngD
RIFOXYD2_FULL_CP_50_16_rifoxyd2_full_scaffold_320_14
RIFOXYD2_FULL_Proteobacteria_50_16_curated, Proteobacteria, Bacteria

Not on your lists

comp(10327..10896)
DNA (570bp) protein (190aa)
peptidyl-tRNA hydrolase; K01056 peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] Tax=RIFOXYD2_FULL_Proteobacteria_50_16_curated
hypothetical protein n=1 Tax=Orenia marismortui RepID=UPI00037BEF06
peptidyl-tRNA hydrolase
RIFOXYD2_FULL_CP_50_16_rifoxyd2_full_scaffold_320_15
RIFOXYD2_FULL_Proteobacteria_50_16_curated, Proteobacteria, Bacteria

Not on your lists


comp(10903..11526)
DNA (624bp) protein (208aa)
50S ribosomal protein L25 n=2 Tax=Rhizobium RepID=U4PZB6_9RHIZ
rplY; 50S ribosomal protein L25 Tax=RIFOXYD2_FULL_Proteobacteria_50_16_curated
rplY; 50S ribosomal protein L25
RIFOXYD2_FULL_CP_50_16_rifoxyd2_full_scaffold_320_16
RIFOXYD2_FULL_Proteobacteria_50_16_curated, Proteobacteria, Bacteria

Not on your lists

11634..12866
DNA (1233bp) protein (411aa)
phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase (EC:4.1.1.36 6.3.2.5); K13038 phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase [EC:4.1.1.3
phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase (EC:4.1.1.36 6.3.2.5)
phosphopantothenoylcysteine decarboxylase n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI0003650B0C
RIFOXYD2_FULL_CP_50_16_rifoxyd2_full_scaffold_320_17
RIFOXYD2_FULL_Proteobacteria_50_16_curated, Proteobacteria, Bacteria

Not on your lists

comp(12863..13051)
DNA (189bp) protein (63aa)
Tax=RIFOXYD2_FULL_Proteobacteria_50_16_curated
RIFOXYD2_FULL_CP_50_16_rifoxyd2_full_scaffold_320_18
RIFOXYD2_FULL_Proteobacteria_50_16_curated, Proteobacteria, Bacteria

Not on your lists

13265..13426
DNA (162bp) protein (54aa)
Tax=RIFOXYD2_FULL_Proteobacteria_50_16_curated
RIFOXYD2_FULL_CP_50_16_rifoxyd2_full_scaffold_320_19
RIFOXYD2_FULL_Proteobacteria_50_16_curated, Proteobacteria, Bacteria

Not on your lists

13678..15006
DNA (1329bp) protein (443aa)
PAS/PAC sensor hybrid histidine kinase n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=D6SMC3_9DELT
histidine kinase Tax=RIFOXYD2_FULL_Proteobacteria_50_16_curated
histidine kinase
RIFOXYD2_FULL_CP_50_16_rifoxyd2_full_scaffold_320_20
RIFOXYD2_FULL_Proteobacteria_50_16_curated, Proteobacteria, Bacteria

Not on your lists

15362..15781
DNA (420bp) protein (140aa)
Molecular chaperone (Small heat shock protein) n=1 Tax=Sphingobium japonicum (strain NBRC 101211 / UT26S) RepID=D4Z498_SPHJU
hsp20; molecular chaperone (small heat shock protein); K13993 HSP20 family protein Tax=RIFOXYD2_FULL_Proteobacteria_50_16_curated
hsp20; molecular chaperone (small heat shock protein)
RIFOXYD2_FULL_CP_50_16_rifoxyd2_full_scaffold_320_21
RIFOXYD2_FULL_Proteobacteria_50_16_curated, Proteobacteria, Bacteria

Not on your lists

15801..16124
DNA (324bp) protein (108aa)
Heat shock protein Hsp20 n=1 Tax=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) RepID=B8DSE1_DESVM
heat shock protein Hsp20 Tax=RIFOXYD2_FULL_Proteobacteria_50_16_curated
heat shock protein Hsp20
RIFOXYD2_FULL_CP_50_16_rifoxyd2_full_scaffold_320_22
RIFOXYD2_FULL_Proteobacteria_50_16_curated, Proteobacteria, Bacteria

Not on your lists

16207..16713
DNA (507bp) protein (169aa)
D-proline reductase (EC:1.21.4.1) id=14429308 bin=bin3_NC10 species=Chloroflexus aurantiacus genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin3_NC10 organism_group=NC10
prdB; D-proline reductase gamma subunit Tax=RIFOXYD2_FULL_Proteobacteria_50_16_curated
prdB; D-proline reductase gamma subunit
RIFOXYD2_FULL_CP_50_16_rifoxyd2_full_scaffold_320_23
RIFOXYD2_FULL_Proteobacteria_50_16_curated, Proteobacteria, Bacteria

Not on your lists

16995..17876
DNA (882bp) protein (294aa)
sulfoxide reductase catalytic subunit YedY n=1 Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI00026286BC
sulfite oxidase-like oxidoreductase Tax=RIFOXYD2_FULL_Proteobacteria_50_16_curated
sulfite oxidase-like oxidoreductase
RIFOXYD2_FULL_CP_50_16_rifoxyd2_full_scaffold_320_24
RIFOXYD2_FULL_Proteobacteria_50_16_curated, Proteobacteria, Bacteria

Not on your lists

17876..18475
DNA (600bp) protein (200aa)
Sulfoxide reductase heme-binding subunit YedZ n=1 Tax=Luminiphilus syltensis NOR5-1B RepID=B8KQI2_9GAMM
ferric reductase domain-containing transmembrane protein Tax=RIFOXYD2_FULL_Proteobacteria_50_16_curated
ferric reductase domain-containing transmembrane protein
RIFOXYD2_FULL_CP_50_16_rifoxyd2_full_scaffold_320_25
RIFOXYD2_FULL_Proteobacteria_50_16_curated, Proteobacteria, Bacteria

Not on your lists

18554..19726
DNA (1173bp) protein (391aa)
S-adenosylmethionine synthetase; K00789 S-adenosylmethionine synthetase [EC:2.5.1.6] Tax=RIFOXYD2_FULL_Proteobacteria_50_16_curated
S-adenosylmethionine synthetase (EC:2.5.1.6)
S-adenosylmethionine synthase id=3145330 bin=GWA1_Deltaproteobacteria_52_35 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
RIFOXYD2_FULL_CP_50_16_rifoxyd2_full_scaffold_320_26
RIFOXYD2_FULL_Proteobacteria_50_16_curated, Proteobacteria, Bacteria

Not on your lists

19733..20008
DNA (276bp) protein (92aa)
Phosphocarrier protein HPr (Histidine-containing protein) (Protein H) n=1 Tax=mine drainage metagenome RepID=E6PNT1_9ZZZZ
phosphotransferase system, phosphocarrier protein HPr; K11189 phosphocarrier protein Tax=RIFOXYD2_FULL_Proteobacteria_50_16_curated
phosphotransferase system, phosphocarrier protein HPr
RIFOXYD2_FULL_CP_50_16_rifoxyd2_full_scaffold_320_27
RIFOXYD2_FULL_Proteobacteria_50_16_curated, Proteobacteria, Bacteria

Not on your lists

20005..20841
DNA (837bp) protein (279aa)
shikimate 5-dehydrogenase; K00014 shikimate dehydrogenase [EC:1.1.1.25] Tax=RIFOXYD2_FULL_Proteobacteria_50_16_curated
Shikimate dehydrogenase n=1 Tax=Thermovibrio ammonificans (strain DSM 15698 / JCM 12110 / HB-1) RepID=E8T3I2_THEA1
shikimate 5-dehydrogenase
RIFOXYD2_FULL_CP_50_16_rifoxyd2_full_scaffold_320_28
RIFOXYD2_FULL_Proteobacteria_50_16_curated, Proteobacteria, Bacteria

Not on your lists

20844..23123
DNA (2280bp) protein (760aa)
adenylate cyclase (EC:4.6.1.1); K01768 adenylate cyclase [EC:4.6.1.1] Tax=RIFOXYD2_FULL_Proteobacteria_50_16_curated
adenylate cyclase (EC:4.6.1.1)
Adenylate cyclase id=3513690 bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
RIFOXYD2_FULL_CP_50_16_rifoxyd2_full_scaffold_320_29
RIFOXYD2_FULL_Proteobacteria_50_16_curated, Proteobacteria, Bacteria

Not on your lists

comp(23264..23527)
DNA (264bp) protein (88aa)
Tax=RIFOXYD2_FULL_Proteobacteria_50_16_curated
RIFOXYD2_FULL_CP_50_16_rifoxyd2_full_scaffold_320_30
RIFOXYD2_FULL_Proteobacteria_50_16_curated, Proteobacteria, Bacteria

Not on your lists

comp(23585..24391)
DNA (807bp) protein (269aa)
Tax=RIFOXYD2_FULL_Proteobacteria_50_16_curated
Displaying 30 items

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