name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
RTP_01242018_0_2um_scaffold_436_1
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5..2776)
|
Putative uncharacterized protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SHL5_THIDA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ97871.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|
|
RTP_01242018_0_2um_scaffold_436_2
GWA2_Gallionellales_54_124_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2831..3835)
|
aspartate-semialdehyde dehydrogenase (EC:1.2.1.11)
Aspartate-semialdehyde dehydrogenase n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SC73_GALCS
Tax=GWA2_Gallionellales_54_124_curated
|
|
RTP_01242018_0_2um_scaffold_436_3
BJP_S1_SUB10_Methylophilales_55_32, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3832..4944)
|
Aspartate-semialdehyde dehydrogenase n=1 Tax=Methylovorus sp. (strain MP688) RepID=E4QI52_METS6
asd; aspartate-semialdehyde dehydrogenase
Tax=BJP_S1_SUB10_Methylophilales_55_32
|
|
RTP_01242018_0_2um_scaffold_436_4
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4962..6026)
|
3-isopropylmalate dehydrogenase (EC:1.1.1.85)
3-isopropylmalate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445};; 3-IPM-DH {ECO:0000256|HAMAP-Rule:MF_01033}; Beta-IPM dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
3-isopropylmalate dehydrogenase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AFP9_9PROT
|
|
RTP_01242018_0_2um_scaffold_436_5
BJP_08E140C01_10KDA_Methylophilales_47_88, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6043..6681)
|
leuD; isopropylmalate isomerase small subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase small subunit n=1 Tax=Pseudogulbenkiania ferrooxidans EGD-HP2 RepID=U1BJ40_9NEIS
Tax=BJP_08E140C01_10KDA_Methylophilales_47_88
|
|
RTP_01242018_0_2um_scaffold_436_6
Aquabacterium sp. NJ1, Aquabacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6678..6803)
|
Entericidin EcnAB n=1 Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GGE1_NITSI
Entericidin {ECO:0000313|EMBL:KGM41324.1}; TaxID=1538295 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Aquabacterium.;" source="Aquabacterium sp. NJ1.;"
entericidin A/B
|
|
RTP_01242018_0_2um_scaffold_436_7
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6814..8217)
|
isopropylmalate isomerase large subunit (EC:4.2.1.33); K01703 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] id=12497947 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
isopropylmalate isomerase large subunit (EC:4.2.1.33)
|
|
RTP_01242018_0_2um_scaffold_436_8
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8280..9302)
|
Putative transporter id=1333548 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
transporter
Tax=GWE1_Thiobacillus_62_9_curated
|
|
RTP_01242018_0_2um_scaffold_436_9
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9427..9981)
|
msrA; peptide methionine sulfoxide reductase MsrA (EC:1.8.4.11)
methionine sulfoxide reductase A n=1 Tax=Ideonella sp. B508-1 RepID=UPI000349B275
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
|
|
RTP_01242018_0_2um_scaffold_436_10
Thiobacillus prosperus, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10063..10479
|
Uncharacterized protein n=2 Tax=Acidithiobacillus caldus RepID=C6NUG9_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KFZ90832.1}; TaxID=160660 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Thiobacillus prosperus.;"
|
|
RTP_01242018_0_2um_scaffold_436_11
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10457..11113
|
DNA-(apurinic or apyrimidinic site) lyase / endonuclease III (EC:3.2.2.- 4.2.99.18); K10773 endonuclease III [EC:4.2.99.18] id=12495624 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
nth; endonuclease III (EC:4.2.99.18)
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
RTP_01242018_0_2um_scaffold_436_12
CG_Beta_01, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11110..12198
|
FIST C domain-containing protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6ACR8_9PROT
FIST C domain-containing protein
Tax=CG_Beta_01
|
|
RTP_01242018_0_2um_scaffold_436_13
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12161..12619
|
hypothetical protein id=12495623 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
RTP_01242018_0_2um_scaffold_436_14
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12627..12920)
|
membrane protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036DEA0E
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
|
|
RTP_01242018_0_2um_scaffold_436_15
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12917..14362)
|
NADH-quinone oxidoreductase subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_00445};; NADH dehydrogenase I subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; NDH-1 subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
NADH-quinone oxidoreductase subunit N n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6B2A9_9PROT
proton-translocating NADH-quinone oxidoreductase, chain N
|
|
RTP_01242018_0_2um_scaffold_436_16
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14382..15869)
|
NADH dehydrogenase subunit M n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AFU4_9PROT
NADH:ubiquinone oxidoreductase subunit M {ECO:0000313|EMBL:GAO36140.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
nuoM; NADH dehydrogenase subunit M
|
|
RTP_01242018_0_2um_scaffold_436_17
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15906..17954)
|
Proton-translocating NADH-quinone oxidoreductase, chain L n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6A9V9_9PROT
NADH:ubiquinone oxidoreductase subunit L {ECO:0000313|EMBL:GAO36141.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
nuoL; proton-translocating NADH-quinone oxidoreductase, chain L
|
|
RTP_01242018_0_2um_scaffold_436_18
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17986..18291)
|
nuoK; NADH dehydrogenase subunit K (EC:1.6.5.3)
NADH-quinone oxidoreductase subunit K id=1326632 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
|
|
RTP_01242018_0_2um_scaffold_436_19
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18304..18921)
|
nuoJ; NADH dehydrogenase I subunit J (EC:1.6.5.3)
NADH:ubiquinone oxidoreductase subunit J n=1 Tax=Thiobacillus thioparus RepID=UPI00035F54A1
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
RTP_01242018_0_2um_scaffold_436_20
Collimonas fungivorans, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18933..19421)
|
nuoI; NADH-ubiquinone oxidoreductase subunit I (EC:1.6.5.3)
NADH-quinone oxidoreductase subunit I {ECO:0000256|HAMAP-Rule:MF_01351}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01351};; NADH dehydrogenase I subunit I {ECO:0000256|HAMAP-Rule:MF_01351}; NDH-1 subunit I {ECO:0000256|HAMAP-Rule:MF_01351}; TaxID=1005048 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Collimonas fungivorans (strain Ter331).;"
NADH-quinone oxidoreductase subunit I n=1 Tax=Collimonas fungivorans (strain Ter331) RepID=G0AJY6_COLFT
|
|
RTP_01242018_0_2um_scaffold_436_21
CG_Beta_01, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19444..20472)
|
NADH-quinone oxidoreductase subunit H n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AFU3_9PROT
nuoH; NuoH protein
Tax=CG_Beta_01
|
|
RTP_01242018_0_2um_scaffold_436_22
R_Gallionellales_57_47, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20474..22822)
|
NADH dehydrogenase subunit G (EC:1.6.5.3)
NADH dehydrogenase subunit G n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YA21_NITMU
Tax=RIFCSPLOWO2_02_FULL_Gallionellales_57_47_curated
|
|
RTP_01242018_0_2um_scaffold_436_23
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22831..24105)
|
NADH-quinone oxidoreductase subunit F (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit F n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AJR4_9PROT
NADH dehydrogenase {ECO:0000313|EMBL:GAO36147.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
|
|
RTP_01242018_0_2um_scaffold_436_24
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24107..24580)
|
nuoE; NADH dehydrogenase subunit E (EC:1.6.5.3); K00334 NADH-quinone oxidoreductase subunit E [EC:1.6.5.3] id=12494878 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
nuoE; NADH dehydrogenase subunit E (EC:1.6.5.3)
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
RTP_01242018_0_2um_scaffold_436_25
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24580..25833)
|
NADH-quinone oxidoreductase subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01358};; NADH dehydrogenase I subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; NDH-1 subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
NADH dehydrogenase subunit D (EC:1.6.99.3)
NADH-quinone oxidoreductase subunit D n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJZ3_9PROT
|
|
RTP_01242018_0_2um_scaffold_436_26
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25833..26432)
|
nuoC; NADH dehydrogenase subunit C (EC:1.6.5.3); K00332 NADH-quinone oxidoreductase subunit C [EC:1.6.5.3] id=12494876 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
NADH dehydrogenase subunit C (EC:1.6.5.3)
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
RTP_01242018_0_2um_scaffold_436_27
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26452..26928)
|
NADH dehydrogenase subunit B (EC:1.6.5.3)
NADH dehydrogenase subunit B n=1 Tax=beta proteobacterium L13 RepID=UPI00036C9DCD
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
|
|
RTP_01242018_0_2um_scaffold_436_28
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26919..27275)
|
NADH-quinone oxidoreductase subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01394};; NADH dehydrogenase I subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; NDH-1 subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; NUO1 {ECO:0000256|HAMAP-Rule:MF_01394}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
NADH-quinone oxidoreductase subunit A n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJW5_9PROT
NAD(P)H-quinone oxidoreductase subunit 3
|
|
RTP_01242018_0_2um_scaffold_436_trna_1
unknown
|
Not on your lists |
comp(27437..27519)
|
transferRNA Leu
|
|
RTP_01242018_0_2um_scaffold_436_29
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(27563..27940)
|
Preprotein translocase subunit SecG n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6ABK2_9PROT
Preprotein translocase subunit SecG {ECO:0000313|EMBL:GAO36153.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
secG; preprotein translocase subunit SecG
|