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RTP_01242018_0_2um_scaffold_1103

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_01242018_0_2um_scaffold_1103_1
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..1251)
DNA (1251bp) protein (417aa)
hypothetical protein n=1 Tax=Nevskia ramosa RepID=UPI0003B69790
hypothetical protein
Tax=RBG_16_Betaproteobacteria_58_11_curated
RTP_01242018_0_2um_scaffold_1103_2
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1524..2027)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AAC0_9PROT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAN35595.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
RTP_01242018_0_2um_scaffold_1103_3
CG_Beta_01, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3812..4534
DNA (723bp) protein (241aa)
Protein serine/threonine phosphatase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6ACH9_9PROT
protein serine/threonine phosphatase
Tax=CG_Beta_01
RTP_01242018_0_2um_scaffold_1103_4
CG_Beta_01, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4542..5243
DNA (702bp) protein (234aa)
FHA domain containing protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6B4T5_9PROT
FHA domain containing protein
Tax=CG_Beta_01
RTP_01242018_0_2um_scaffold_1103_5
GWA2_Gallionellales_59_43_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5230..6075)
DNA (846bp) protein (282aa)
Ribosomal RNA large subunit methyltransferase J n=1 Tax=Pseudogulbenkiania ferrooxidans 2002 RepID=B9Z566_9NEIS
hypothetical protein
Tax=GWA2_Gallionellales_59_43_curated
RTP_01242018_0_2um_scaffold_1103_6
Herminiimonas arsenicoxydans, Herminiimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6183..7610
DNA (1428bp) protein (476aa)
sbcB; exonuclease I (EC:3.1.11.1)
Exodeoxyribonuclease I (Exonuclease I) (DNA deoxyribophosphodiesterase) (DRPase) {ECO:0000313|EMBL:CAL60786.1}; EC=3.1.11.1 {ECO:0000313|EMBL:CAL60786.1};; TaxID=204773 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herminiimonas.;" source="Herminiimonas arsenicoxydans.;"
Exodeoxyribonuclease I (Exonuclease I) (DNA deoxyribophosphodiesterase) (DRPase) n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G2P9_HERAR
RTP_01242018_0_2um_scaffold_1103_7
CG_Beta_01, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7620..8456
DNA (837bp) protein (279aa)
hypothetical protein n=1 Tax=Thiomonas sp. FB-6 RepID=UPI00035EE07B
Ion transport 2 domain-containing protein
Tax=CG_Beta_01
RTP_01242018_0_2um_scaffold_1103_8
Nitrosomonas europaea, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8398..9153)
DNA (756bp) protein (252aa)
tRNA/rRNA methyltransferase SpoU (EC:2.1.1.-)
tRNA/rRNA methyltransferase (SpoU) {ECO:0000313|EMBL:CAD84686.1}; EC=2.1.1.- {ECO:0000313|EMBL:CAD84686.1};; TaxID=228410 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298).;"
tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q820P1_NITEU
RTP_01242018_0_2um_scaffold_1103_9
R_Gallionellales_57_47, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9150..9797)
DNA (648bp) protein (216aa)
hypothetical protein n=1 Tax=Geopsychrobacter electrodiphilus RepID=UPI0003730946
multiple antibiotic resistance (MarC)-like protein
Tax=RIFCSPLOWO2_02_FULL_Gallionellales_57_47_curated
RTP_01242018_0_2um_scaffold_1103_10
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9823..11220)
DNA (1398bp) protein (466aa)
Metal-dependent phosphohydrolase, HD subdomain n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47CE9_DECAR
metal-dependent phosphohydrolase
Tax=RBG_16_Gamma2_60_9_curated
RTP_01242018_0_2um_scaffold_1103_11
Methylovorus glucosotrophus, Methylovorus, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11245..12609)
DNA (1365bp) protein (455aa)
cysteinyl-tRNA synthetase (EC:6.1.1.16)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=582744 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylovorus.;" source="Methylovorus glucosetrophus (strain SIP3-4).;"
Cysteine--tRNA ligase n=1 Tax=Methylovorus sp. (strain SIP3-4) RepID=C6X9V0_METSD
RTP_01242018_0_2um_scaffold_1103_12
RBG_16_Betaproteobacteria_56_24_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12701..13615
DNA (915bp) protein (305aa)
TPR repeat-containing protein id=12497926 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein
Tax=RBG_16_Betaproteobacteria_56_24_curated
RTP_01242018_0_2um_scaffold_1103_13
RBG_16_Betaproteobacteria_56_24_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13743..14234
DNA (492bp) protein (164aa)
peptidyl-prolyl cis-trans isomerase B (EC:5.2.1.8)
cyclophilin n=1 Tax=Thiobacillus thioparus RepID=UPI0003604044
Tax=RBG_16_Betaproteobacteria_56_24_curated
RTP_01242018_0_2um_scaffold_1103_14
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14240..14992
DNA (753bp) protein (251aa)
UDP-2,3-diacylglucosamine hydrolase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AJN6_9PROT
UDP-2,3-diacylglucosamine hydrolase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
RTP_01242018_0_2um_scaffold_1103_15
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15176..15847)
DNA (672bp) protein (224aa)
Putative uncharacterized protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SHM7_THIDA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ97859.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
Displaying 15 items

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