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RTP_01242018_0_2um_scaffold_1115

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_01242018_0_2um_scaffold_1115_1
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..89)
DNA (87bp) protein (29aa)
Peptidase {ECO:0000313|EMBL:KGF82212.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
peptidase
RTP_01242018_0_2um_scaffold_1115_2
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(89..685)
DNA (597bp) protein (199aa)
Glutathione S-transferase-like protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AF27_9PROT
glutathione S-transferase-like protein
Glutathione S-transferase-like protein {ECO:0000313|EMBL:BAN34451.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
RTP_01242018_0_2um_scaffold_1115_3
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(762..1472)
DNA (711bp) protein (237aa)
ubiquinol-cytochrome c reductase cytochrome c1 subunit; K00413 ubiquinol-cytochrome c reductase cytochrome c1 subunit id=12493486 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
Cytochrome C {ECO:0000313|EMBL:GAO35855.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
ubiquinol-cytochrome c reductase cytochrome c1 subunit
RTP_01242018_0_2um_scaffold_1115_4
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1472..2695)
DNA (1224bp) protein (408aa)
cytochrome B n=1 Tax=Thiobacillus denitrificans RepID=UPI00037FA39A
cytochrome B subunit of cytochrome bc1
Cytochrome b {ECO:0000256|RuleBase:RU003385}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RTP_01242018_0_2um_scaffold_1115_5
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2699..3292)
DNA (594bp) protein (198aa)
Ubiquinol-cytochrome c reductase iron-sulfur subunit n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AB91_9PROT
Ubiquinol-cytochrome C reductase {ECO:0000313|EMBL:GAO35857.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
ubiquinol-cytochrome c reductase, iron-sulfur subunit
RTP_01242018_0_2um_scaffold_1115_6
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3469..4590
DNA (1122bp) protein (374aa)
2-alkenal reductase n=1 Tax=Thiobacillus denitrificans RepID=UPI000367C883
peptidase S1 and S6, chymotrypsin/Hap
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_01242018_0_2um_scaffold_1115_7
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4660..6141)
DNA (1482bp) protein (494aa)
glucose-6-phosphate 1-dehydrogenase (EC:1.1.1.49)
glucose 6-phosphate dehydrogenase n=1 Tax=Thiobacillus thioparus RepID=UPI00037D7284
Tax=CG_Hydro_01
RTP_01242018_0_2um_scaffold_1115_8
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6138..7055)
DNA (918bp) protein (306aa)
6-phosphogluconate dehydrogenase, decarboxylating (EC:1.1.1.44)
6-phosphogluconate dehydrogenase n=1 Tax=Thiobacillus thioparus RepID=UPI00037D1298
Tax=RBG_16_Betaproteobacteria_58_11_curated
RTP_01242018_0_2um_scaffold_1115_9
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7205..7813)
DNA (609bp) protein (203aa)
Glutathione S-transferase domain protein n=1 Tax=Pseudogulbenkiania ferrooxidans 2002 RepID=B9Z1J5_9NEIS
glutathione S-transferase
Tax=RBG_16_Betaproteobacteria_58_11_curated
RTP_01242018_0_2um_scaffold_1115_10
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7823..9265)
DNA (1443bp) protein (481aa)
threonine synthase (EC:4.2.3.1)
Threonine synthase n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BYV9_9GAMM
Threonine synthase {ECO:0000313|EMBL:EIJ36552.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
RTP_01242018_0_2um_scaffold_1115_11
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9278..10594)
DNA (1317bp) protein (439aa)
homoserine dehydrogenase (EC:1.1.1.3)
homoserine dehydrogenase n=1 Tax=Thiobacillus thioparus RepID=UPI0003646415
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_01242018_0_2um_scaffold_1115_12
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10618..11871)
DNA (1254bp) protein (418aa)
aminotransferase (EC:2.6.1.-)
Probable aspartate transaminase n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SKI6_THIDA
Probable aspartate transaminase {ECO:0000313|EMBL:AAZ96795.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RTP_01242018_0_2um_scaffold_1115_13
unknown

Not on your lists

11958..12071
DNA (114bp) protein (38aa)

This feature has no annotations

Displaying 13 items

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