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RTP_01242018_0_2um_scaffold_1294

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_01242018_0_2um_scaffold_1294_1

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comp(2..1420)
DNA (1419bp) protein (473aa)
DNA repair protein RecN (Recombination protein N) n=1 Tax=mine drainage metagenome RepID=E6QUI2_9ZZZZ
DNA repair protein RecN (Recombination protein N) {ECO:0000313|EMBL:CBI10905.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
DNA repair protein RecN
RTP_01242018_0_2um_scaffold_1294_2
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1420..2292)
DNA (873bp) protein (291aa)
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037468}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
NAD kinase (EC:2.7.1.23)
Probable inorganic polyphosphate/ATP-NAD kinase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6A9V1_9PROT
RTP_01242018_0_2um_scaffold_1294_3
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

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2356..3375
DNA (1020bp) protein (340aa)
Heat-inducible transcription repressor hrcA n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AJP5_9PROT
hrcA; heat-inducible transcription repressor HrcA
Heat-inducible transcription repressor HrcA {ECO:0000256|HAMAP-Rule:MF_00081, ECO:0000256|SAAS:SAAS00101987}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
RTP_01242018_0_2um_scaffold_1294_4
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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3380..4489
DNA (1110bp) protein (370aa)
hemH; ferrochelatase (EC:4.99.1.1)
ferrochelatase n=1 Tax=Thiobacillus thioparus RepID=UPI0003617E6C
Tax=GWE1_Thiobacillus_62_9_curated
RTP_01242018_0_2um_scaffold_1294_5
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4680..5135)
DNA (456bp) protein (152aa)
Cytochrome c, class II n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21YG5_RHOFD
class II cytochrome c
Cytochrome c, class II {ECO:0000313|EMBL:ABD69188.1}; Flags: Precursor;; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
RTP_01242018_0_2um_scaffold_1294_6
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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5272..7233
DNA (1962bp) protein (654aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003692EE7
site-specific recombinase
Tax=GWE1_Thiobacillus_62_9_curated
RTP_01242018_0_2um_scaffold_1294_7
GWA2_Gallionellales_55_18_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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7310..7555
DNA (246bp) protein (82aa)
Regulatory protein, FmdB family n=1 Tax=Burkholderia sp. CCGE1001 RepID=E8YMI7_9BURK
putative regulatory protein, FmdB family
Tax=GWA2_Gallionellales_55_18_curated
RTP_01242018_0_2um_scaffold_1294_8
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

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7569..8180
DNA (612bp) protein (204aa)
Transmembrane protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AIY6_9PROT
Membrane protein {ECO:0000313|EMBL:GAO35814.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
transmembrane protein
RTP_01242018_0_2um_scaffold_1294_9
Methylovorus glucosotrophus, Methylovorus, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

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8191..9930
DNA (1740bp) protein (580aa)
aspartyl-tRNA synthetase n=1 Tax=Methylotenera RepID=UPI000371FAF7
aspS; aspartyl-tRNA synthetase
Aspartyl-tRNA synthetase {ECO:0000313|EMBL:ACT51689.1}; TaxID=582744 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylovorus.;" source="Methylovorus glucosetrophus (strain SIP3-4).;"
RTP_01242018_0_2um_scaffold_1294_10
Achromobacter piechaudii, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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10230..10682
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Achromobacter piechaudii HLE RepID=J4QRM4_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EJO30700.1}; TaxID=1156919 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter piechaudii HLE.;"
RTP_01242018_0_2um_scaffold_1294_11
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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10859..11581
DNA (723bp) protein (241aa)
Putative uncharacterized protein n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WLH4_9BURK
Putative uncharacterized protein {ECO:0000313|EMBL:EHR70701.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
hypothetical protein
RTP_01242018_0_2um_scaffold_1294_12
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(11606..12550)
DNA (945bp) protein (315aa)
transposase IS116 n=1 Tax=Pseudomonas pelagia RepID=UPI00039EEF0A
transposase of an IS110 family member
Transposase of an IS110 family member {ECO:0000313|EMBL:CAZ89015.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
Displaying 12 items

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