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RTP_01242018_0_2um_scaffold_1393

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_01242018_0_2um_scaffold_1393_1
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(198..788)
DNA (591bp) protein (197aa)
putative SCO1/SenC family protein; K07152 id=12494817 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
electron transport protein SCO1/SenC
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_01242018_0_2um_scaffold_1393_2
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(788..1249)
DNA (462bp) protein (154aa)
BadM/Rrf2 family transcriptional regulator id=12495696 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
BadM/Rrf2 family transcriptional regulator
Tax=CG_Hydro_01
RTP_01242018_0_2um_scaffold_1393_3
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1254..2111)
DNA (858bp) protein (286aa)
4-hydroxybenzoate octaprenyltransferase (EC:2.5.1.-); K03179 4-hydroxybenzoate octaprenyltransferase [EC:2.5.1.-] id=12497821 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
ubiA; 4-hydroxybenzoate octaprenyltransferase (EC:2.5.1.-)
Tax=RBG_16_Betaproteobacteria_58_11_curated
RTP_01242018_0_2um_scaffold_1393_4
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2108..2626)
DNA (519bp) protein (173aa)
Probable chorismate pyruvate-lyase {ECO:0000256|HAMAP-Rule:MF_01632}; Short=CL {ECO:0000256|HAMAP-Rule:MF_01632};; Short=CPL {ECO:0000256|HAMAP-Rule:MF_01632};; EC=4.1.3.40 {ECO:0000256|HAMAP-Rule:MF_01632};; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
Probable chorismate pyruvate-lyase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6A9M2_9PROT
chorismate--pyruvate lyase
RTP_01242018_0_2um_scaffold_1393_5
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2642..3442)
DNA (801bp) protein (267aa)
Tax=RBG_16_Betaproteobacteria_58_11_curated
RTP_01242018_0_2um_scaffold_1393_6

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comp(3518..5548)
DNA (2031bp) protein (677aa)
ATP-dependent DNA helicase recG {ECO:0000313|EMBL:CBI10787.1}; EC=3.6.1.- {ECO:0000313|EMBL:CBI10787.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
ATP-dependent DNA helicase recG n=1 Tax=mine drainage metagenome RepID=E6QU65_9ZZZZ
ATP-dependent DNA helicase RecG
RTP_01242018_0_2um_scaffold_1393_7
BJP_S1_SUB10_Methylophilales_55_32, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5554..5934)
DNA (381bp) protein (127aa)
Endoribonuclease L-PSP n=1 Tax=Methylotenera mobilis (strain JLW8 / ATCC BAA-1282 / DSM 17540) RepID=C6WYX1_METML
conserved hypothetical protein
Tax=BJP_S1_SUB10_Methylophilales_55_32
RTP_01242018_0_2um_scaffold_1393_8
unknown

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comp(5965..6081)
DNA (117bp) protein (39aa)

This feature has no annotations

RTP_01242018_0_2um_scaffold_1393_9
Burkholderia sp. AU4i, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6081..6428)
DNA (348bp) protein (116aa)
peptidase M4 n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI00036413C6
mmfA; peptidase M4
Uncharacterized protein {ECO:0000313|EMBL:ERJ33222.1}; TaxID=1335308 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia sp. AU4i.;"
RTP_01242018_0_2um_scaffold_1393_10
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6719..8833
DNA (2115bp) protein (705aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI00031FF2A6
PA-phosphatase {ECO:0000313|EMBL:GAO35504.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
PA-phosphatase-like phosphoesterase
RTP_01242018_0_2um_scaffold_1393_11
unknown

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8796..8870
DNA (75bp) protein (25aa)

This feature has no annotations

Displaying 11 items

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