ggKbase home page

RTP_01242018_0_2um_scaffold_1706

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_01242018_0_2um_scaffold_1706_1
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..135
DNA (135bp) protein (45aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6QTZ2_9ZZZZ
hypothetical protein
Tax=GWA2_Rhodocyclales_65_20_curated
RTP_01242018_0_2um_scaffold_1706_2
Laribacter hongkongensis, Laribacter, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

146..1558
DNA (1413bp) protein (471aa)
Fis family transcriptional regulator n=1 Tax=Nevskia ramosa RepID=UPI0003B600C2
Mg chelatase subunit ChlI
Mg chelatase-related protein {ECO:0000313|EMBL:ACO75915.1}; TaxID=557598 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Laribacter.;" source="Laribacter hongkongensis (strain HLHK9).;"
RTP_01242018_0_2um_scaffold_1706_3
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1568..2623
DNA (1056bp) protein (352aa)
Conserved membrane protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SM61_THIDA
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
RTP_01242018_0_2um_scaffold_1706_4
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2702..3001
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6QU12_9ZZZZ
hypothetical protein
Tax=BJP_IG2102_Gammaproteobacteria_62_140
RTP_01242018_0_2um_scaffold_1706_5
unknown

Not on your lists

3015..3482
DNA (468bp) protein (156aa)

This feature has no annotations

RTP_01242018_0_2um_scaffold_1706_6
Ferriphaselus amnicola, Ferriphaselus, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3490..4260)
DNA (771bp) protein (257aa)
Exodeoxyribonuclease III {ECO:0000313|EMBL:GAO34075.1}; EC=3.1.11.2 {ECO:0000313|EMBL:GAO34075.1};; TaxID=1188319 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Ferriphaselus.;" source="Ferriphaselus amnicola.;"
Exodeoxyribonuclease III Xth n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CQD2_SIDLE
exodeoxyribonuclease III Xth
RTP_01242018_0_2um_scaffold_1706_7

Not on your lists

comp(4257..4766)
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6QU15_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBI10737.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
RTP_01242018_0_2um_scaffold_1706_8
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4801..6822)
DNA (2022bp) protein (674aa)
prlC; oligopeptidase A (EC:3.4.24.70)
Oligopeptidase A {ECO:0000313|EMBL:BAN34053.1}; EC=3.4.24.70 {ECO:0000313|EMBL:BAN34053.1};; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
Oligopeptidase A n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AAT5_9PROT
RTP_01242018_0_2um_scaffold_1706_9
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6926..7390
DNA (465bp) protein (155aa)
Transferase hexapeptide repeat containing protein n=1 Tax=Methylovorus sp. (strain SIP3-4) RepID=C6XAY9_METSD
transferase
Tax=RBG_16_Betaproteobacteria_58_11_curated
Displaying 9 items

View Taxonomy