ggKbase home page

RTP_01242018_0_2um_scaffold_1776

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_01242018_0_2um_scaffold_1776_1
unknown

Not on your lists

comp(1..75)
DNA (75bp) protein (25aa)

This feature has no annotations

RTP_01242018_0_2um_scaffold_1776_2
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(95..709)
DNA (615bp) protein (205aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00035DD89D
sporulation domain-containing protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_01242018_0_2um_scaffold_1776_3

Not on your lists


comp(722..2464)
DNA (1743bp) protein (581aa)
Arginyl-tRNA synthetase {ECO:0000313|EMBL:CBI10284.1}; EC=6.1.1.19 {ECO:0000313|EMBL:CBI10284.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
argS; arginyl-tRNA synthetase (EC:6.1.1.19)
Arginyl-tRNA synthetase n=1 Tax=mine drainage metagenome RepID=E6QSR2_9ZZZZ
RTP_01242018_0_2um_scaffold_1776_4
Sedimenticola sp. SIP-G1, Sedimenticola, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2527..2907
DNA (381bp) protein (127aa)
Putative uncharacterized protein n=1 Tax=Thiocapsa marina 5811 RepID=F9UHY9_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:AKH20553.1}; TaxID=1543721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Sedimenticola.;" source="Sedimenticola sp. SIP-G1.;"
RTP_01242018_0_2um_scaffold_1776_5
Ferriphaselus amnicola, Ferriphaselus, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2904..3239
DNA (336bp) protein (112aa)
hypothetical protein n=1 Tax=Chitiniphilus shinanonensis RepID=UPI00036938BC
UPF0102 protein OYT1_02238 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=1188319 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Ferriphaselus.;" source="Ferriphaselus amnicola.;"
hypothetical protein
RTP_01242018_0_2um_scaffold_1776_6
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3294..3884
DNA (591bp) protein (197aa)
Phosphoheptose isomerase {ECO:0000255|HAMAP-Rule:MF_00067}; EC=5.3.1.28 {ECO:0000255|HAMAP-Rule:MF_00067};; Sedoheptulose 7-phosphate isomerase {ECO:0000255|HAMAP-Rule:MF_00067}; TaxID=76114 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum aromaticum (strain EbN1) (Azoarcus sp. (strain EbN1)).;"
Phosphoheptose isomerase n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=GMHA_AROAE
gmhA; phosphoheptose isomerase
RTP_01242018_0_2um_scaffold_1776_7
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3884..4471
DNA (588bp) protein (196aa)
Putative periplasmic or secreted lipoprotein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AAW6_9PROT
putative periplasmic or secreted lipoprotein
Putative periplasmic or secreted lipoprotein {ECO:0000313|EMBL:BAN36310.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
RTP_01242018_0_2um_scaffold_1776_8
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4464..4958
DNA (495bp) protein (165aa)
nucleotidyltransferase n=1 Tax=Chitiniphilus shinanonensis RepID=UPI000373E86A
RfaE bifunctional protein {ECO:0000313|EMBL:GAO37123.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
rfaE bifunctional protein
RTP_01242018_0_2um_scaffold_1776_9
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4955..6265
DNA (1311bp) protein (437aa)
3-octaprenyl-4-hydroxybenzoate carboxy-lyase {ECO:0000256|HAMAP-Rule:MF_01636}; EC=4.1.1.- {ECO:0000256|HAMAP-Rule:MF_01636};; Polyprenyl p-hydroxybenzoate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01636}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
3-octaprenyl-4-hydroxybenzoate carboxy-lyase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AIJ8_9PROT
3-octaprenyl-4-hydroxybenzoate carboxy-lyase
Displaying 9 items

View Taxonomy