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RTP_01242018_0_2um_scaffold_2207

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_01242018_0_2um_scaffold_2207_1
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..251
DNA (249bp) protein (83aa)
Putative uncharacterized protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KX49_HALNC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACX97169.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
RTP_01242018_0_2um_scaffold_2207_2
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

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244..1335
DNA (1092bp) protein (364aa)
Putative ATPase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AGZ2_9PROT
putative ATPase
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
RTP_01242018_0_2um_scaffold_2207_3
R_Rhodocyclales_63_24, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1388..2716)
DNA (1329bp) protein (443aa)
Transposase, IS204/IS1001/IS1096/IS1165 family protein n=1 Tax=mine drainage metagenome RepID=T1CXY6_9ZZZZ
transposase family protein
Tax=RIFCSPLOWO2_02_FULL_Rhodocyclales_63_24_curated
RTP_01242018_0_2um_scaffold_2207_4
Azotobacter vinelandii, Azotobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2797..3327)
DNA (531bp) protein (177aa)
Uncharacterized protein n=3 Tax=Azotobacter vinelandii RepID=M9XX41_AZOVI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACO81114.1}; TaxID=322710 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Azotobacter.;" source="Azotobacter vinelandii (strain DJ / ATCC BAA-1303).;"
RTP_01242018_0_2um_scaffold_2207_5
Polaromonas sp. CG9_12, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3324..3617)
DNA (294bp) protein (98aa)
hypothetical protein n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI0003734B02
Predicted nucleotidyltransferases {ECO:0000313|EMBL:CDS54614.1}; TaxID=1504672 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CG9_12.;"
DNA polymerase, beta-like region-containing protein
RTP_01242018_0_2um_scaffold_2207_6

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3974..4864
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6QU34_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBI10756.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
transcriptional regulator
RTP_01242018_0_2um_scaffold_2207_7
Leptospirillum ferrodiazotrophum, Leptospirillum, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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4957..7365
DNA (2409bp) protein (803aa)
CRISPR-associated helicase, Cas3 n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HV91_9BACT
CRISPR-associated helicase, Cas3 {ECO:0000313|EMBL:EES53465.1}; TaxID=412449 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Leptospirillum.;" source="Leptospirillum ferrodiazotrophum.;"
CRISPR-associated helicase Cas3
RTP_01242018_0_2um_scaffold_2207_8

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7370..7696
DNA (327bp) protein (109aa)
DNA-binding protein (Fragment) n=1 Tax=mine drainage metagenome RepID=T0ZE58_9ZZZZ
DNA-binding protein {ECO:0000313|EMBL:EQD27079.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
Displaying 8 items

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