ggKbase home page

RTP_01242018_0_2um_scaffold_1281_8

Organism: RTP_01242018_0_2um_Betaproteobacteria_47_58

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 2
Location: comp(4595..6580)

Top 3 Functional Annotations

Value Algorithm Source
Type II secretory pathway, component HofQ n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6ADN8_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 57.6
  • Coverage: 661.0
  • Bit_score: 726
  • Evalue 2.20e-206
type II secretory pathway, component HofQ similarity KEGG
DB: KEGG
  • Identity: 57.6
  • Coverage: 661.0
  • Bit_score: 726
  • Evalue 6.30e-207
Type II secretory pathway, component HofQ {ECO:0000313|EMBL:BAN36613.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.6
  • Coverage: 661.0
  • Bit_score: 726
  • Evalue 3.10e-206

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sulfuricella denitrificans → Sulfuricella → Sulfuricellales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1986
TTGAAACTGAATTTGTATAAATTACGCTGGTTAACACTCGCCATCATCTCGGCTCAACTCGCTGGTTGTGCAGGCGAAAAAGCTTTCCGCGATGGGAATCAACAACTACGTGAAGGTAAAATAGAAGCTGGACTAACCCAGCTAGAAGCTGCCATTAAAGCTGAGCCAAACAATCTGGAGTATCGTGCCAGCTTGTTACGCCAGCGCCAAGAGCAGATTTACAAACTATTAAGTCAAGCAGAACAACTCATAAATGCAGGCGATCCGGACGAAGCGCAAACCGTGTACCAACGAGTGCTTAAAATTGATGCCGCTAATCAGCGTGCGACTGAAGGTTTGATCCGCATCCAGAACAACCAGACGCAAAATGCCATAGTCGCAAAAGCGCAGGCGTTATTCGATGCTGACAATCCTGAAGGGGCACTAAGCTTATTGCGTCCGATCCTGAATGAAATGCCTAATCACTCAACAGCCAAGGCCCTACAACAAAAAATCCGAGACAAACAGGCGCAACTAAAACCCTCCACAACCGCGCTGAAATCCAGTATCAAGAAACCCATCACGCTGGAATTCCGCGACGCAAACATGCGCTCGATATTTGAAGTAATTTCACGTACTGCCAACATCAATTTCATTTTTGATAAAGATGTGAACCCTAATCTTAAATCTACCCTCTATGTCAAAAACACCACGATAGAGGAAGCGATTAACTTGCTGCTAGTCACCAATCAACTAGAAAAACGCATACTCAATGACAACACCATACTCATTTACCCTAACACGCCCGCCAAAACAAAAGATTATCAAGAGCTCACCGTTAAAAGTTTTTACCTCGCCAATGCCGATGTAAAACAGACACTGTCCATGATTAAAACCATATTGAAAACCCGTGATGTATTTATCGACGAAAAACTCAATATGCTAATGATGCGCGACACGCCTGATGTGATTCGCCTTGCTGAAAAAATGATTGCTGCACAAGATATTGCCGAGCCAGAAGTTATTCTGGATGTTGAAATACTTGAAGTTAAGCGCTCTAAACTCAGTGAATTAGGCATACAGTACCCTAACAAATTAACCGTGCTCAGTCCCAGCACAGTGCCTACCACCACCACATCCAGCACAGGCTCCACTCTCGTTGTCAATACCGTATCTACAAATGCCCAGCTCACCTTGGCTAATTTGATAGGGCTCAATACAAGCAGGATAGGCATCAGCAATCCCGCCTTAAATATACGTGCTGAAGACAGCGATACCAGCTTGCTTGCTAACCCACGTATCCGCGTCCGCAATCGTGAAAAAGCGAAAATTCACATAGGCGAAAAAGTGCCTGTCATCACCACCACCAGCTCGATTAATATCGGACTGGCTGAGTCAGTGAGCTATCTTGATGTTGGACTCAAACTCGACGTGGAACCCAATATTTATTTAGAGAACGAAGTTGCTATCAAAGTCGCTCTGGAAGTCAGTAATATTGTTCGCGAAATCAAAGGCACTAATGGCTCGCTAACCTACCAGGTTGGCACCCGTAACGCGGCCACGGTTTTACGTCTTAAAGATGGTGAAACCCAAGCACTAGCGGGACTCATTAGTGATGAAGATCGCAGCAGTGCAAACAAAGTTCCTGGTTTAGGCGACATTCCTTTATTAGGCAGACTGTTCTCCAGTCATCGTGATGAAAAAACAAAAACAGAAATTATTTTGCTAATTACACCGCATATCGTACGTAACTTGATTAAACCGGAGACGGGAATGATAGAGTTTCTATCAGGTACGGACACTACCACAGGGAGCGCGCCATTAATGATTACACCGACCACTATCGTGCCTACACCCGCTACACCCCAACAACTAGGTATACCAGCGCGACCTAACAATCTTCCCAATATACCGCAGCAGTTAAATCAACCACCCATACCAGCCCAGCCCGCAACGACATTCCCGGCACCTGCCTCGGTGACCACTACCCCAGTGCCAACACCATAA
PROTEIN sequence
Length: 662
LKLNLYKLRWLTLAIISAQLAGCAGEKAFRDGNQQLREGKIEAGLTQLEAAIKAEPNNLEYRASLLRQRQEQIYKLLSQAEQLINAGDPDEAQTVYQRVLKIDAANQRATEGLIRIQNNQTQNAIVAKAQALFDADNPEGALSLLRPILNEMPNHSTAKALQQKIRDKQAQLKPSTTALKSSIKKPITLEFRDANMRSIFEVISRTANINFIFDKDVNPNLKSTLYVKNTTIEEAINLLLVTNQLEKRILNDNTILIYPNTPAKTKDYQELTVKSFYLANADVKQTLSMIKTILKTRDVFIDEKLNMLMMRDTPDVIRLAEKMIAAQDIAEPEVILDVEILEVKRSKLSELGIQYPNKLTVLSPSTVPTTTTSSTGSTLVVNTVSTNAQLTLANLIGLNTSRIGISNPALNIRAEDSDTSLLANPRIRVRNREKAKIHIGEKVPVITTTSSINIGLAESVSYLDVGLKLDVEPNIYLENEVAIKVALEVSNIVREIKGTNGSLTYQVGTRNAATVLRLKDGETQALAGLISDEDRSSANKVPGLGDIPLLGRLFSSHRDEKTKTEIILLITPHIVRNLIKPETGMIEFLSGTDTTTGSAPLMITPTTIVPTPATPQQLGIPARPNNLPNIPQQLNQPPIPAQPATTFPAPASVTTTPVPTP*