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RTP_01242018_0_2um_scaffold_1281

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_01242018_0_2um_scaffold_1281_1
Anaerolinea thermophila, Anaerolinea, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

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1..1116
DNA (1116bp) protein (372aa)
hypothetical protein n=1 Tax=Methylovulum miyakonense RepID=UPI0003733615
putative thermolysin family peptidase
Putative thermolysin family peptidase {ECO:0000313|EMBL:BAJ64823.1}; TaxID=926569 species="Bacteria; Chloroflexi; Anaerolineae; Anaerolineales; Anaerolineaceae; Anaerolinea.;" source="Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 /; UNI-1).;"
RTP_01242018_0_2um_scaffold_1281_2
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

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1234..1842
DNA (609bp) protein (203aa)
Lytic transglycosylase catalytic n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6ABA5_9PROT
lytic transglycosylase catalytic
Lytic transglycosylase catalytic {ECO:0000313|EMBL:BAN36620.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
RTP_01242018_0_2um_scaffold_1281_3
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2002..2442)
DNA (441bp) protein (147aa)
id=4961698 bin=GWC2_Nitrospirae-rel_56_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RTP_01242018_0_2um_scaffold_1281_4
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2603..2947)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VSZ5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL90336.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
RTP_01242018_0_2um_scaffold_1281_5
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3157..3675)
DNA (519bp) protein (173aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002D77FFA
gspG; type II secretion system pseudopilin PulG
Tax=RBG_16_Betaproteobacteria_58_11_curated
RTP_01242018_0_2um_scaffold_1281_6
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3669..4115)
DNA (447bp) protein (149aa)
N-terminal methylation site n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y5V1_NITMU
N-terminal methylation site
Tax=RBG_16_Betaproteobacteria_58_11_curated
RTP_01242018_0_2um_scaffold_1281_7
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4115..4594)
DNA (480bp) protein (160aa)
Putative uncharacterized protein n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CSW7_SIDLE
hypothetical protein
Tax=RBG_16_Betaproteobacteria_58_11_curated
RTP_01242018_0_2um_scaffold_1281_8
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4595..6580)
DNA (1986bp) protein (662aa)
Type II secretory pathway, component HofQ n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6ADN8_9PROT
type II secretory pathway, component HofQ
Type II secretory pathway, component HofQ {ECO:0000313|EMBL:BAN36613.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
RTP_01242018_0_2um_scaffold_1281_9
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6577..7089)
DNA (513bp) protein (171aa)
Probable prolin-rich transmembrane protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SJB5_THIDA
Uncharacterized protein {ECO:0000313|EMBL:GAO36450.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
prolin-rich transmembrane protein
RTP_01242018_0_2um_scaffold_1281_10
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7089..7640)
DNA (552bp) protein (184aa)
Putative transmembrane protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AJR3_9PROT
putative transmembrane protein
Putative transmembrane protein {ECO:0000313|EMBL:BAN36611.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
RTP_01242018_0_2um_scaffold_1281_11
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7637..8176)
DNA (540bp) protein (180aa)
Transmembrane protein n=1 Tax=Methylotenera sp. (strain 301) RepID=D7DMD6_METS0
transmembrane protein
Tax=RBG_16_Betaproteobacteria_58_11_curated
RTP_01242018_0_2um_scaffold_1281_12
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8178..9005)
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6ANX9_9PROT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAN36609.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
RTP_01242018_0_2um_scaffold_1281_13
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8986..10026)
DNA (1041bp) protein (347aa)
Type II secretion system protein E n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6ADN6_9PROT
type II secretion system protein E
Tax=RBG_16_Betaproteobacteria_58_11_curated
Displaying 13 items

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