ggKbase home page

RTP_01242018_0_2um_scaffold_1036_14

Organism: RTP_01242018_0_2um_Betaproteobacteria_47_58

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 2
Location: comp(11686..12165)

Top 3 Functional Annotations

Value Algorithm Source
Ribosome maturation factor RimM n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=RIMM_THIDA similarity UNIREF
DB: UNIREF100
  • Identity: 54.1
  • Coverage: 159.0
  • Bit_score: 180
  • Evalue 1.10e-42
16S rRNA-processing protein RimM similarity KEGG
DB: KEGG
  • Identity: 54.1
  • Coverage: 159.0
  • Bit_score: 180
  • Evalue 3.10e-43
Ribosome maturation factor RimM {ECO:0000255|HAMAP-Rule:MF_00014}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.1
  • Coverage: 159.0
  • Bit_score: 180
  • Evalue 1.50e-42

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 480
ATGGGTCGCATTGCGATCCCGTATGGTGTTAAGGGCTGGATGAAAATTCAGACTTTCACCGAGGCAGTGGATACCCTCGCAGACTATGCTGAATGGTATGTGAAGCGTGGTAGTGATTGGCAAGTTTATACGGTTGCCAATGCTAAATTACATACTAAAAGTTTAGTTGCTGAACTAGTCGGTGTTGATGACAGAGACCAAGCGCTGGCATTGAAAGGTTGTGAAATTGCGGTGTTAAGCGATACGCTACCTGCTCCTGCTGAGGGTGAATACTACTGGTCTGATTTAATTGGATTGGCAGTAGTCAATGCGCGTGGCGATGCTTTTGGCAATATAGAAAAAATCCTCGAAGCGGGTGCGCATGACGTATTGGTAGTGCGTGGTACGCGTGAACATTTGATTCCTTTTGTTGGTAAGGTCGTGCAAAAAGTGGACTTGGACGCGAAAGCAGTCGTGGTCGATTGGGAGCTGGATTACTAA
PROTEIN sequence
Length: 160
MGRIAIPYGVKGWMKIQTFTEAVDTLADYAEWYVKRGSDWQVYTVANAKLHTKSLVAELVGVDDRDQALALKGCEIAVLSDTLPAPAEGEYYWSDLIGLAVVNARGDAFGNIEKILEAGAHDVLVVRGTREHLIPFVGKVVQKVDLDAKAVVVDWELDY*