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RTP_01242018_0_2um_scaffold_2528_1

Organism: RTP_01242018_0_2um_Betaproteobacteria_47_58

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 2
Location: 1..495

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase factor sigma-54 (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 80.5
  • Coverage: 164.0
  • Bit_score: 269
  • Evalue 5.20e-70
RNA polymerase, sigma 54 (Sigma N) factor n=1 Tax=mine drainage metagenome RepID=E6QSF6_9ZZZZ similarity UNIREF
DB: UNIREF100
  • Identity: 84.1
  • Coverage: 164.0
  • Bit_score: 281
  • Evalue 3.60e-73
RNA polymerase, sigma 54 (Sigma N) factor {ECO:0000313|EMBL:CBI10178.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.1
  • Coverage: 164.0
  • Bit_score: 281
  • Evalue 5.00e-73

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Taxonomy

mine drainage metagenome

Sequences

DNA sequence
Length: 495
GATGCTAATCATCAACAGTTGTCAGGGCAGTTGCAAGAAGCTAAGTGGCTGATTAAGAATATTATGCAGCGATTTGATACGATATTGCGGGTGACGCAATGTATTGTCGATAGGCAAAAACATTTTTTTGAGCACGGTGAAGTGGCGATGCGCCCCTTGGTATTGCGTGAAATTGCTGATATTGTTGAGTTACATGAATCCACCGTATCGCGTGTGACCACCCAGAAATTTATGATGACACCTCGTGGTATCTTTGAATTAAAATACTTTTTTGGCAGCCATGTGAATACGGACGCGGGCGGAGCTTGCTCAGCAACCGCAATTCGTGCGTTAATTAAACAACTAATTAGCGCAGAGAATACGAAAAAGCCATTATCCGACGGGAAGATCGCAGAGGTTCTCGTGCAACAGGGTATTAACGTTGCCAGGCGAACCATTGCCAAGTATCGGGAATCGATGCAAATTCCTCCCGCCAACCAGCGCAAAGCGCTATAA
PROTEIN sequence
Length: 165
DANHQQLSGQLQEAKWLIKNIMQRFDTILRVTQCIVDRQKHFFEHGEVAMRPLVLREIADIVELHESTVSRVTTQKFMMTPRGIFELKYFFGSHVNTDAGGACSATAIRALIKQLISAENTKKPLSDGKIAEVLVQQGINVARRTIAKYRESMQIPPANQRKAL*