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RTP_01242018_0_2um_scaffold_2528_2

Organism: RTP_01242018_0_2um_Betaproteobacteria_47_58

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 2
Location: 518..868

Top 3 Functional Annotations

Value Algorithm Source
Putative sigma(54) modulation protein RpoX n=1 Tax=mine drainage metagenome RepID=E6QSF7_9ZZZZ similarity UNIREF
DB: UNIREF100
  • Identity: 74.5
  • Coverage: 106.0
  • Bit_score: 171
  • Evalue 4.80e-40
Putative sigma(54) modulation protein RpoX {ECO:0000313|EMBL:CBI10179.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.5
  • Coverage: 106.0
  • Bit_score: 171
  • Evalue 6.80e-40
sigma 54 modulation protein similarity KEGG
DB: KEGG
  • Identity: 63.3
  • Coverage: 109.0
  • Bit_score: 150
  • Evalue 1.90e-34

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Taxonomy

mine drainage metagenome

Sequences

DNA sequence
Length: 351
ATGAACCTCAAAATTACCGGTCATCATCTGGAAATTACCCCAGCAATTCGTGAGTATGTCACCACTAAAATGGAGCGCGTTAAACGCCATTTTGATCACGTGATTGATCTTAGCGTTATTATGACTGTAGAAAAATTGAAACATAGTGTTGAGGCGAATGTACACATGAGTGGTAAAAACATTTTTGTGCAGGCTGAAGATGTGGATATGTACGCGGCGATTGATGCCCTGGCTGATAAACTGGATCGTCAAGTGGTCAAGCATAAAGAAAAGCACAGTGCTACCCATCAAGCAGAGGGTGGTATCAAACATAAAGCTTTGGCTGAAAACGCTGTGGTTGAAGAAGAGTAA
PROTEIN sequence
Length: 117
MNLKITGHHLEITPAIREYVTTKMERVKRHFDHVIDLSVIMTVEKLKHSVEANVHMSGKNIFVQAEDVDMYAAIDALADKLDRQVVKHKEKHSATHQAEGGIKHKALAENAVVEEE*