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RTP_01242018_0_2um_scaffold_1096_24

Organism: RTP_01242018_0_2um_Betaproteobacteria_47_58

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 2
Location: comp(16498..18171)

Top 3 Functional Annotations

Value Algorithm Source
Type IV conjugative transfer system coupling protein TraD n=2 Tax=mine drainage metagenome RepID=T0ZZA0_9ZZZZ similarity UNIREF
DB: UNIREF100
  • Identity: 35.8
  • Coverage: 475.0
  • Bit_score: 288
  • Evalue 7.60e-75
Type IV conjugative transfer system coupling protein TraD {ECO:0000313|EMBL:EQD53571.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 35.8
  • Coverage: 475.0
  • Bit_score: 288
  • Evalue 1.10e-74
type IV secretory pathway vird4 component similarity KEGG
DB: KEGG
  • Identity: 36.1
  • Coverage: 421.0
  • Bit_score: 287
  • Evalue 8.20e-75

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Taxonomy

mine drainage metagenome

Sequences

DNA sequence
Length: 1674
ATGATGTATGGGCCAATCTTAGTTGTGACAGCGACGTTACTGTTCGCGCTGTGGATGTTTAACCCATCAACCATTGTAAAGCAGGTTTTGCTGTTCCCGATTTTTACATTTTGGAAAATTACGTTTTGGCAGATGCCGCGTTTTGTGTACTCGATTTACAGAGAAAAAGACGACATTCAAAAAGCAGACCTGATGCCTGTGCTTGTTTTTTTGGTGGCGGTCGTAATAACAGCAATAGGGCTTGTAGCTGCCGCAACAGGCAAATTTAGCCTTACCATCTTGGCTGGTCCGCTTGGCTGGGTTGTGGCCGAATGGTGGTTTTTTGGGCGCGGGAACGACCAAGAAAACAAACATGTGCGCGGGGCGTATTTCATGGATCTAACCTACCTGAAAGAACTTAAAAAAGACGCGGATTCAGCACTGGAAATTGGCGGTATCCCGATTCCTCGTCGAATTGAAACGGTTCATTTTCTGGCCAGCGGCATGATTGGAACAGGAAAATCGCAGGCGATAAATGGACTGCTGGACACTGTCCGCGCGCGCGAAAACAAGGCAATGGTAGTGGACTCGGGTGCAGAAGCCTTTGCACGCTGGTATAAAGACGGCGACACTATCTTAAACCCATTTGATGCACGTACCGCCAGATGGTCACCGCTAGCTGAAATGACTGGACCGTGGGACGGGGCACGAATTGCGCTGGCGTTCATAGCAGAAACAAAAGGTTCTGCTGAAGAATGGAATGTCTATGCACGCCAAATTTTGGAAGCAACGCTGGCACACGTATTTGCGGCAGGCGGAACAAACGCCGACATTATCAATGTGGCGGCGCTGAGCTCCCCCGAAGAGCTGGAAATTATTGTTGCAGGCAAACCAGTGGCCGCTTTGTTTCATCCTGGCTCAGCCAAAATGCTGGACAACGTCCGATCAATCATAGGTGCGAAGCTCTCAGCGATGCAGTGGCTGGATCCCGATGCAGGCGTTGATGCGTTCAGTGTGCGCCGATGGGTGAGAGACGAAGAAAACAAAACTTGGATTTGGATGCAATACAAAGAAGAGTTCTTTGAGCAGATTAAACCCCTGATTGCGGCGTGGTGTGGACTTTTGACAGATTCCGTATTGTCACTGGATGCAAATCACGAGCGCAGGATTTTCCTTGTTGTGGATGAGCTAGGCGCATTGCCTAAAATTTCAGGGTTCACCTCGGCCATGACACGCGGCAGAAAATTCGGGTTATGCGTTGTGGCTGGTATTCAGTCGATTTCGCAACTAAGGGACATCTACGGCCGGGATGGTGCGCAAACATTGCTATCAAATTTCGGGTCGTGGTTGATTTTGCGTGCCGGCGACAAAGAGACTGCAGAGTACATGGAGCAACATTTGGGCAAAGCGCAGATAATCAGGACTGAAACCAGCACGACTAAAAACCAAAGCGGCGAGTCAACGAGCACTTCGCATCGACACACCGATGAATCGTTAGTCATGTATTCGGACATCATGAAATTCAAAAACCTGTCTGGCGTTTTATCACTGGCAGACGGCATCCCAGCCGCTTTTGTTCAGATTCCGCTTATCGTTCGTGAGCCAAAAACGGCGGCGTGGATACCGCGCGACTTCGCAAAAACCAAGAAAATGCCTGAAATGCCAGTTTTCTCAAGTCAGTTTGAGGATATTTAG
PROTEIN sequence
Length: 558
MMYGPILVVTATLLFALWMFNPSTIVKQVLLFPIFTFWKITFWQMPRFVYSIYREKDDIQKADLMPVLVFLVAVVITAIGLVAAATGKFSLTILAGPLGWVVAEWWFFGRGNDQENKHVRGAYFMDLTYLKELKKDADSALEIGGIPIPRRIETVHFLASGMIGTGKSQAINGLLDTVRARENKAMVVDSGAEAFARWYKDGDTILNPFDARTARWSPLAEMTGPWDGARIALAFIAETKGSAEEWNVYARQILEATLAHVFAAGGTNADIINVAALSSPEELEIIVAGKPVAALFHPGSAKMLDNVRSIIGAKLSAMQWLDPDAGVDAFSVRRWVRDEENKTWIWMQYKEEFFEQIKPLIAAWCGLLTDSVLSLDANHERRIFLVVDELGALPKISGFTSAMTRGRKFGLCVVAGIQSISQLRDIYGRDGAQTLLSNFGSWLILRAGDKETAEYMEQHLGKAQIIRTETSTTKNQSGESTSTSHRHTDESLVMYSDIMKFKNLSGVLSLADGIPAAFVQIPLIVREPKTAAWIPRDFAKTKKMPEMPVFSSQFEDI*