name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
RTP_02272018_0_2um_scaffold_280_1
unknown
|
Not on your lists |
comp(3..275)
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036A920E
|
|
RTP_02272018_0_2um_scaffold_280_2
Burkholderia sp. SJ98, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(292..516)
|
Uncharacterized protein n=1 Tax=Burkholderia sp. SJ98 RepID=K8RGQ7_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EKS72182.1}; TaxID=406819 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. SJ98.;"
hypothetical protein
|
|
RTP_02272018_0_2um_scaffold_280_3
Cupriavidus necator, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(674..1168)
|
Uncharacterized protein n=1 Tax=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) RepID=Q0K1K4_CUPNH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAJ96120.1}; TaxID=381666 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337); (Ralstonia eutropha).;"
|
|
RTP_02272018_0_2um_scaffold_280_4
Burkholderia pseudomallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1364..2758)
|
Putative uncharacterized protein n=1 Tax=Ralstonia solanacearum K60-1 RepID=H5WB66_RALSL
TniQ family protein {ECO:0000313|EMBL:AJX77783.1}; TaxID=1249472 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia pseudomallei MSHR2543.;"
hypothetical protein
|
|
RTP_02272018_0_2um_scaffold_280_5
Thauera sp. 63, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2755..4284)
|
Uncharacterized protein n=1 Tax=Thauera sp. 63 RepID=N6Y592_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:ENO77617.1}; TaxID=497321 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. 63.;"
hypothetical protein
|
|
RTP_02272018_0_2um_scaffold_280_6
Cupriavidus sp. HMR-1, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4271..5314)
|
TniB family protein n=1 Tax=Cupriavidus sp. HMR-1 RepID=L2EF63_9BURK
TniB family protein {ECO:0000313|EMBL:EKZ97876.1}; TaxID=1249621 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HMR-1.;"
TniB family protein
|
|
RTP_02272018_0_2um_scaffold_280_7
Cupriavidus sp. HMR-1, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5317..7353)
|
hypothetical protein n=1 Tax=Uliginosibacterium gangwonense RepID=UPI0003806DE8
Integrase catalytic subunit {ECO:0000313|EMBL:EKZ97877.1}; TaxID=1249621 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HMR-1.;"
integrase catalytic subunit
|
|
RTP_02272018_0_2um_scaffold_280_8
Cupriavidus sp. HMR-1, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7334..8035)
|
hypothetical protein n=1 Tax=Uliginosibacterium gangwonense RepID=UPI000363DC52
TnsA endonuclease {ECO:0000313|EMBL:EKZ98156.1}; TaxID=1249621 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HMR-1.;"
TnsA endonuclease
|
|
RTP_02272018_0_2um_scaffold_280_9
Cupriavidus sp. HMR-1, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8293..8721)
|
Helix-turn-helix domain-containing protein n=1 Tax=Cupriavidus sp. HMR-1 RepID=L2EFN7_9BURK
Helix-turn-helix domain-containing protein {ECO:0000313|EMBL:EKZ98155.1}; TaxID=1249621 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HMR-1.;"
helix-turn-helix domain-containing protein
|
|
RTP_02272018_0_2um_scaffold_280_10
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9197..9718
|
Uncharacterized protein n=1 Tax=Ralstonia solanacearum (strain Po82) RepID=F6G0I9_RALS8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEG68834.1}; TaxID=1031711 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum (strain Po82).;"
|
|
RTP_02272018_0_2um_scaffold_280_11
Thauera phenylacetica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9818..12919
|
Putative DNA methylase n=1 Tax=Thauera phenylacetica B4P RepID=N6ZXP7_9RHOO
Putative DNA methylase {ECO:0000313|EMBL:ENO99118.1}; TaxID=1234382 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera phenylacetica B4P.;"
putative DNA methylase
|
|
RTP_02272018_0_2um_scaffold_280_12
RHI_Sphingopyxis_65_19, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12916..13632
|
Uncharacterized protein n=1 Tax=Thauera phenylacetica B4P RepID=N7A4A1_9RHOO
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated
|
|
RTP_02272018_0_2um_scaffold_280_13
RBG_16_Gallionellales_57_15_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13898..15625)
|
gyrB; DNA gyrase subunit B (EC:5.99.1.3)
DNA gyrase subunit B n=1 Tax=Thiobacillus thioparus RepID=UPI0003613858
Tax=RBG_16_Gallionellales_57_15_curated
|
|
RTP_02272018_0_2um_scaffold_280_14
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15781..16272)
|
gyrB; DNA gyrase subunit B (EC:5.99.1.3)
DNA gyrase subunit B id=1307779 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
|
|
RTP_02272018_0_2um_scaffold_280_15
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16356..17459)
|
DNA polymerase III subunit beta (EC:2.7.7.7)
DNA polymerase III subunit beta n=1 Tax=Thiobacillus thioparus RepID=UPI000370F794
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
RTP_02272018_0_2um_scaffold_280_16
RBG_16_Gallionellales_57_15_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17639..19012)
|
Chromosomal replication initiator protein DnaA id=1307777 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
chromosome replication initiator DnaA
Tax=RBG_16_Gallionellales_57_15_curated
|
|
RTP_02272018_0_2um_scaffold_280_17
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19208..19342
|
50S ribosomal protein L34 id=1307776 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
50S ribosomal protein L34
Tax=GWE1_Thiobacillus_62_9_curated
|
|
RTP_02272018_0_2um_scaffold_280_18
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19397..19768
|
ribonuclease P protein component (EC:3.1.26.5)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037A9350
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
RTP_02272018_0_2um_scaffold_280_19
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19787..21427
|
Membrane protein insertase YidC id=1307774 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
protein translocase subunit yidC
Tax=GWE1_Thiobacillus_62_9_curated
|
|
RTP_02272018_0_2um_scaffold_280_20
Gallionella capsiferriformans, Gallionella, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21783..22703)
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037BB185
transcriptional regulator, LysR family
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ADL56921.1}; TaxID=395494 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Gallionella.;" source="Gallionella capsiferriformans (strain ES-2) (Gallionella ferruginea; capsiferriformans (strain ES-2)).;"
|
|
RTP_02272018_0_2um_scaffold_280_21
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22706..23713)
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000381B8FF
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding subunit
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
|
|
RTP_02272018_0_2um_scaffold_280_22
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23731..24528)
|
phosphate ABC transporter permease n=1 Tax=Thiobacillus denitrificans RepID=UPI00036FC8BA
phosphonate ABC transporter, inner membrane subunit
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
|
|
RTP_02272018_0_2um_scaffold_280_23
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24546..25412)
|
phosphate ABC transporter substrate-binding protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003623A03
phosphonate ABC transporter periplasmic phosphonate-binding protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
|
|
RTP_02272018_0_2um_scaffold_280_24
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25415..26221)
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037AEC24
phosphonate ABC transporter ATP-binding protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
|
|
RTP_02272018_0_2um_scaffold_280_25
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
26829..28169
|
tRNA modification GTPase MnmE id=1307773 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
tRNA modification GTPase TrmE
Tax=GWE1_Thiobacillus_62_9_curated
|
|
RTP_02272018_0_2um_scaffold_280_26
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
28176..29942
|
ABC transporter ATP-binding protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000361EF1F
ABC transporter ATPase
Tax=GWE1_Thiobacillus_62_9_curated
|
|
RTP_02272018_0_2um_scaffold_280_27
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
30030..31754
|
RNA helicase n=1 Tax=Thiobacillus thioparus RepID=UPI000369E785
DEAD/DEAH box helicase
DEAD/DEAH box helicase {ECO:0000313|EMBL:AAZ98768.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|
|
RTP_02272018_0_2um_scaffold_280_28
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
31988..32635
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037024F6
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
|
|
RTP_02272018_0_2um_scaffold_280_29
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
33180..33644
|
allophanate hydrolase subunit 2 (EC:3.5.1.54)
Allophanate hydrolase subunit 2 {ECO:0000313|EMBL:AAZ98765.1}; EC=3.5.1.54 {ECO:0000313|EMBL:AAZ98765.1};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036BF6DD
|
|
RTP_02272018_0_2um_scaffold_280_30
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
33641..34351
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000365B919
LamB/YcsF family protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|