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RTP_02272018_0_2um_scaffold_813

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_02272018_0_2um_scaffold_813_1
Thiolapillus brandeum, Thiolapillus, Gammaproteobacteria, Proteobacteria, Bacteria

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3..485
DNA (483bp) protein (161aa)
Multicopper oxidase type 3 n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GQK7_THISH
multicopper oxidase type 3
Thiolapillus brandeum DNA, complete genome {ECO:0000313|EMBL:BAO44612.1}; TaxID=1076588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiolapillus.;" source="Thiolapillus brandeum.;"
RTP_02272018_0_2um_scaffold_813_2
RBG_16_Gallionellales_56_9_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

582..1952
DNA (1371bp) protein (457aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036D89A1
heavy metal efflux system protein
Tax=RBG_16_Gallionellales_56_9_curated
RTP_02272018_0_2um_scaffold_813_3
RBG_16_Betaproteobacteria_56_24_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1964..5077
DNA (3114bp) protein (1038aa)
cusA; RND family outer membrane copper/silver/drug transport protein id=12493239 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
cusA; RND family outer membrane copper/silver/drug transport protein
Tax=RBG_16_Betaproteobacteria_56_24_curated
RTP_02272018_0_2um_scaffold_813_4
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5118..6098)
DNA (981bp) protein (327aa)
Putative uncharacterized protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SHC0_THIDA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ97966.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RTP_02272018_0_2um_scaffold_813_5
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6315..7928)
DNA (1614bp) protein (538aa)
Putative esterase n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SHC1_THIDA
esterase
Putative esterase {ECO:0000313|EMBL:AAZ97965.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RTP_02272018_0_2um_scaffold_813_6
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7957..8397)
DNA (441bp) protein (147aa)
Putative esterase n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SHC1_THIDA
esterase
Putative esterase {ECO:0000313|EMBL:AAZ97965.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RTP_02272018_0_2um_scaffold_813_7
unknown

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comp(8490..8621)
DNA (132bp) protein (44aa)

This feature has no annotations

RTP_02272018_0_2um_scaffold_813_8
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8773..9441)
DNA (669bp) protein (223aa)
phosphoserine phosphatase (EC:3.1.3.3)
phosphoserine phosphatase n=1 Tax=Thiobacillus denitrificans RepID=UPI0003663FAA
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_02272018_0_2um_scaffold_813_9
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9479..10147)
DNA (669bp) protein (223aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003683F2A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ97963.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RTP_02272018_0_2um_scaffold_813_10
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10298..14200
DNA (3903bp) protein (1301aa)
ATP-dependent helicase n=1 Tax=Thiobacillus thioparus RepID=UPI00036799EC
ATP-dependent helicase HrpA
ATP-dependent helicase HrpA {ECO:0000313|EMBL:AAZ97961.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RTP_02272018_0_2um_scaffold_813_11
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14214..14789
DNA (576bp) protein (192aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036018F7
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_02272018_0_2um_scaffold_813_12
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14776..15993)
DNA (1218bp) protein (406aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036CDB1B
diguanylate cyclase/phosphodiesterase
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_02272018_0_2um_scaffold_813_13
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16047..16595)
DNA (549bp) protein (183aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036A8495
peroxiredoxin-like protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_02272018_0_2um_scaffold_813_14
Nitrosococcus watsonii, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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16828..17814
DNA (987bp) protein (329aa)
Integrase family protein n=1 Tax=Nitrosococcus watsoni (strain C-113) RepID=D8K7N5_NITWC
integrase family protein
Integrase family protein {ECO:0000313|EMBL:ADJ28912.1}; TaxID=105559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus watsoni (strain C-113).;"
RTP_02272018_0_2um_scaffold_813_15
BJP_IG2158_Methylococcales_50_91, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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18184..19596
DNA (1413bp) protein (471aa)
hypothetical protein n=1 Tax=Methylomonas sp. MK1 RepID=UPI0003726F67
hypothetical protein
Tax=BJP_IG2158_Methylococcales_50_91
RTP_02272018_0_2um_scaffold_813_16

Not on your lists

comp(19770..20072)
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=I6YQ09_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AFN66378.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
RTP_02272018_0_2um_scaffold_813_17

Not on your lists

comp(20069..21010)
DNA (942bp) protein (314aa)
Putative integrase n=1 Tax=uncultured bacterium RepID=I6ZME9_9BACT
Putative integrase {ECO:0000313|EMBL:AFN66379.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
RTP_02272018_0_2um_scaffold_813_18
unknown

Not on your lists

comp(21797..22090)
DNA (294bp) protein (98aa)
hypothetical protein id=12498594 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
RTP_02272018_0_2um_scaffold_813_19
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22167..22451)
DNA (285bp) protein (95aa)
transcriptional regulator n=1 Tax=Thiobacillus denitrificans RepID=UPI0003671370
histone family protein DNA-binding protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_02272018_0_2um_scaffold_813_20
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23142..23768
DNA (627bp) protein (209aa)
Putative uncharacterized protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SKD2_THIDA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ96853.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RTP_02272018_0_2um_scaffold_813_21
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23758..24993
DNA (1236bp) protein (412aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036588F9
secretion protein HlyD
Secretion protein HlyD {ECO:0000313|EMBL:AAZ96854.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RTP_02272018_0_2um_scaffold_813_22
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25013..28123
DNA (3111bp) protein (1037aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036080D9
Heavy metal efflux pump CzcA {ECO:0000313|EMBL:AAZ96855.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
heavy metal efflux pump CzcA
RTP_02272018_0_2um_scaffold_813_23
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28212..28460
DNA (249bp) protein (83aa)
multi-sensor signal transduction histidine kinase (EC:2.7.3.-)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037606E2
Displaying 23 items

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