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RTP_02272018_0_2um_scaffold_567

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_02272018_0_2um_scaffold_567_1
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(384..1088)
DNA (705bp) protein (235aa)
Crp/Fnr family transcriptional regulator n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6B0M2_9PROT
Crp/Fnr family transcriptional regulator
Crp/Fnr family transcriptional regulator {ECO:0000313|EMBL:BAN34227.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
RTP_02272018_0_2um_scaffold_567_2
Sideroxydans lithotrophicus, Sideroxydans, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1376..1807
DNA (432bp) protein (144aa)
Cytochrome c class I n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CQX3_SIDLE
Cytochrome C class I
Cytochrome c class I {ECO:0000313|EMBL:ADE11359.1}; TaxID=580332 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Sideroxydans.;" source="Sideroxydans lithotrophicus (strain ES-1).;"
RTP_02272018_0_2um_scaffold_567_3
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1851..3227
DNA (1377bp) protein (459aa)
Nitric-oxide reductase subunit B n=3 Tax=Thauera RepID=N6YG42_9RHOO
Nitric-oxide reductase subunit B {ECO:0000313|EMBL:KIF81946.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;"
nitric-oxide reductase subunit B
RTP_02272018_0_2um_scaffold_567_4
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3288..4118
DNA (831bp) protein (277aa)
ATPase AAA n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AB45_9PROT
ATPase AAA {ECO:0000313|EMBL:GAO35217.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
cbbQ; ATPase AAA
RTP_02272018_0_2um_scaffold_567_5
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4099..4509
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6B0U2_9PROT
Cytochrome C oxidase subunit III {ECO:0000313|EMBL:GAO35218.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
hypothetical protein
RTP_02272018_0_2um_scaffold_567_6
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4499..5527
DNA (1029bp) protein (343aa)
Iron-sulfur cluster-binding protein n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CQX8_SIDLE
iron-sulfur cluster-binding protein
Tax=BJP_IG2102_Gammaproteobacteria_62_140
RTP_02272018_0_2um_scaffold_567_7
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5540..7369
DNA (1830bp) protein (610aa)
von Willebrand factor type A n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6B0T4_9PROT
von Willebrand factor type A
von Willebrand factor type A {ECO:0000313|EMBL:BAN34292.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
RTP_02272018_0_2um_scaffold_567_8
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7479..10034)
DNA (2556bp) protein (852aa)
multi-sensor hybrid histidine kinase (EC:2.7.3.-)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00035DF613
Multi-sensor Hybrid Histidine Kinase {ECO:0000313|EMBL:AAZ96940.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RTP_02272018_0_2um_scaffold_567_9
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10046..11113)
DNA (1068bp) protein (356aa)
cell division protein FtsE n=1 Tax=Thiobacillus denitrificans RepID=UPI00037D3891
transport system ATPase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_02272018_0_2um_scaffold_567_10
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11120..12787)
DNA (1668bp) protein (556aa)
FeT family ferric iron ABC transporter permease n=1 Tax=Thiobacillus denitrificans RepID=UPI000382426C
iron transport system permease
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_02272018_0_2um_scaffold_567_11
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12968..13975)
DNA (1008bp) protein (336aa)
iron deficiency-induced protein A n=1 Tax=Thiobacillus denitrificans RepID=UPI00037C8C72
ABC transporter iron binding protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_02272018_0_2um_scaffold_567_12
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14080..14757)
DNA (678bp) protein (226aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00035F5A88
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ96944.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RTP_02272018_0_2um_scaffold_567_13
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14750..15226)
DNA (477bp) protein (159aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037A7DBC
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_02272018_0_2um_scaffold_567_14
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15302..15991
DNA (690bp) protein (230aa)
Putative uncharacterized protein id=1352758 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_567_15
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16228..17892
DNA (1665bp) protein (555aa)
2-octaprenylphenol hydroxylase (EC:1.14.13.-)
ubiquinone biosynthesis protein UbiB n=1 Tax=Thiobacillus thioparus RepID=UPI0003659501
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_567_16
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18039..20309)
DNA (2271bp) protein (757aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036E9BCB
diguanylate cyclase/phosphodiesterase
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_567_17
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20306..21160)
DNA (855bp) protein (285aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037BA1C1
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_567_18
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21281..23257
DNA (1977bp) protein (659aa)
helicase n=1 Tax=Thiobacillus thioparus RepID=UPI0003725147
helicase c2
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_02272018_0_2um_scaffold_567_19
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25080..25535)
DNA (456bp) protein (152aa)
peroxiredoxin n=1 Tax=Thiobacillus thioparus RepID=UPI00037A08DE
bacterioferritin comigratory protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_02272018_0_2um_scaffold_567_20
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25548..26204)
DNA (657bp) protein (219aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003773CEE
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_567_21
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26212..27174)
DNA (963bp) protein (321aa)
thioredoxin reductase (EC:1.8.1.9)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
Thioredoxin reductase id=1348793 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
RTP_02272018_0_2um_scaffold_567_22
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27384..29612
DNA (2229bp) protein (743aa)
cell division protein FtsK n=1 Tax=Thiobacillus denitrificans RepID=UPI000376A5D2
DNA translocase FtsK
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_02272018_0_2um_scaffold_567_23
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29609..30310
DNA (702bp) protein (234aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Thiobacillus thioparus RepID=UPI00037A9EDA
4-diphosphocytidyl-2C-methyl-D-erythritol synthase
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_02272018_0_2um_scaffold_567_24
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30303..30785
DNA (483bp) protein (161aa)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:4.6.1.12)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Thiobacillus thioparus RepID=UPI000361FDCA
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_02272018_0_2um_scaffold_567_25
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30793..31350
DNA (558bp) protein (186aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000372D354
2'-5' RNA ligase
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_02272018_0_2um_scaffold_567_trna_1
unknown

Not on your lists

31420..31493
DNA (74bp)
transferRNA Val
Displaying 26 items

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