name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
RTP_02272018_0_2um_scaffold_805_1
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
66..581
|
rpsE; 30S ribosomal protein S5; K02988 small subunit ribosomal protein S5 id=12495306 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
rpsE; 30S ribosomal protein S5
Tax=GWE1_Thiobacillus_62_9_curated
|
|
RTP_02272018_0_2um_scaffold_805_2
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
585..770
|
rpmD; 50S ribosomal protein L30
50S ribosomal protein L30 id=1337003 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
RTP_02272018_0_2um_scaffold_805_3
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
771..1205
|
50S ribosomal protein L15P; K02876 large subunit ribosomal protein L15 id=12495304 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
50S ribosomal protein L15
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
RTP_02272018_0_2um_scaffold_805_4
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1225..2538
|
Protein translocase subunit SecY id=1337005 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
secY; preprotein translocase subunit SecY
Tax=GWE1_Thiobacillus_62_9_curated
|
|
RTP_02272018_0_2um_scaffold_805_5
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2538..2756
|
infA; translation initiation factor IF-1; K02518 translation initiation factor IF-1 id=12498464 bin=THIO_MID species=unknown genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
infA; translation initiation factor IF-1
Translation initiation factor IF-1 1 {ECO:0000255|HAMAP-Rule:MF_00075}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|
|
RTP_02272018_0_2um_scaffold_805_6
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3002..3358
|
rpsM; 30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 id=12495301 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
rpsM; 30S ribosomal protein S13
Tax=GWE1_Thiobacillus_62_9_curated
|
|
RTP_02272018_0_2um_scaffold_805_7
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3368..3760
|
30S ribosomal protein S11 id=1337008 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
30S ribosomal protein S11
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
RTP_02272018_0_2um_scaffold_805_8
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3775..4404
|
30S ribosomal protein S4 id=1337009 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
rpsD; 30S ribosomal protein S4
Tax=GWE1_Thiobacillus_62_9_curated
|
|
RTP_02272018_0_2um_scaffold_805_9
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4434..5414
|
DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha id=1337010 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
|
|
RTP_02272018_0_2um_scaffold_805_10
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5499..5888
|
50S ribosomal protein L17 n=1 Tax=Thiobacillus denitrificans RepID=UPI000375CB3B
50S ribosomal protein L17
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
RTP_02272018_0_2um_scaffold_805_11
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6022..6750
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000368F620
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
|
|
RTP_02272018_0_2um_scaffold_805_12
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6900..8360)
|
hydroxypyruvate reductase (EC:1.1.1.81)
Hydroxypyruvate reductase id=1337013 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
|
|
RTP_02272018_0_2um_scaffold_805_13
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8481..8750)
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000377EBE0
lipoprotein
Tax=GWE1_Thiobacillus_62_9_curated
|
|
RTP_02272018_0_2um_scaffold_805_14
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8877..9611)
|
ribosomal large subunit pseudouridine synthase F (EC:5.4.99.-)
Pseudouridine synthase, Rsu id=1337017 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
|
|
RTP_02272018_0_2um_scaffold_805_15
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9880..12702)
|
excinuclease ABC subunit A n=1 Tax=Thiobacillus thioparus RepID=UPI00036C33A3
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_00205}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
excinuclease ABC subunit A
|
|
RTP_02272018_0_2um_scaffold_805_16
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12801..14156
|
membrane protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037D015B
major facilitator transporter
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
RTP_02272018_0_2um_scaffold_805_17
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14207..14698
|
single-stranded DNA-binding protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036BD88D
single-strand binding protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
RTP_02272018_0_2um_scaffold_805_18
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14767..16833
|
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000377DAC5
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
RTP_02272018_0_2um_scaffold_805_19 |
Not on your lists |
16947..17204
|
Regulatory protein, FmdB family n=1 Tax=sediment metagenome RepID=D9PMS5_9ZZZZ
Regulatory protein, FmdB family {ECO:0000313|EMBL:EFK95148.1}; TaxID=749907 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="sediment metagenome.;"
hypothetical protein
|
|
RTP_02272018_0_2um_scaffold_805_20 |
Not on your lists |
17469..19259
|
Aspartyl-tRNA synthetase {ECO:0000313|EMBL:EFK95333.1}; EC=6.1.1.12 {ECO:0000313|EMBL:EFK95333.1};; TaxID=749907 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="sediment metagenome.;"
aspS; aspartyl-tRNA synthetase (EC:6.1.1.12)
aspartyl-tRNA synthetase n=1 Tax=Thiobacillus denitrificans RepID=UPI00036DAC15
|
|
RTP_02272018_0_2um_scaffold_805_21
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19424..19729
|
RNA polymerase subunit sigma-32 n=1 Tax=Thiobacillus denitrificans RepID=UPI0003665A40
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
|
|
RTP_02272018_0_2um_scaffold_805_22
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19726..20166
|
NUDIX hydrolase id=1360783 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
ntpA; dATP pyrophosphohydrolase
Tax=GWE1_Thiobacillus_62_9_curated
|
|
RTP_02272018_0_2um_scaffold_805_23
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20174..20926
|
endonuclease/exonuclease/phosphatase n=1 Tax=Thiobacillus thioparus RepID=UPI000372674B
endonuclease / exonuclease / phosphatase
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
RTP_02272018_0_2um_scaffold_805_24
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20926..22116
|
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000374C430
phospholipase D/transphosphatidylase
Tax=GWE1_Thiobacillus_62_9_curated
|
|
RTP_02272018_0_2um_scaffold_805_25
BJP_IG2158_Anaerolineales_38_74, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria
|
Not on your lists |
22404..22640
|
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000381819E
Tax=BJP_IG2158_Anaerolineales_38_74
|
|
RTP_02272018_0_2um_scaffold_805_26
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22637..23047
|
PilT protein domain protein n=1 Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=B3E766_GEOLS
PilT protein domain-containing protein
Tax=RBG_16_Betaproteobacteria_58_11_curated
|