Consensus taxonomy: Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria
Taxonomy override: Betaproteobacteria
contig | # features | sequence size | GC content (%) | Cov | Coding Density (%) | |
---|---|---|---|---|---|---|
RTP_02272018_0_2um_scaffold_2178
Species:
GWE1_Thiobacillus_62_9_curated (50%)
|
20 | 8362 bp | 57.37 | 28.95 | 94.97 | |
RTP_02272018_0_2um_scaffold_798
Order:
Hydrogenophilales (57.89%)
|
19 | 23510 bp | 62.11 | 28.14 | 87.40 | |
RTP_02272018_0_2um_scaffold_1044
Order:
Hydrogenophilales (73.68%)
|
19 | 17929 bp | 63.90 | 24.20 | 92.70 | |
RTP_02272018_0_2um_scaffold_1929
Order:
Hydrogenophilales (52.94%)
|
17 | 9315 bp | 59.10 | 34.67 | 90.43 | |
RTP_02272018_0_2um_scaffold_1320
Order:
Hydrogenophilales (93.75%)
|
16 | 14192 bp | 64.15 | 25.03 | 93.06 | |
RTP_02272018_0_2um_scaffold_1858
Species:
Thiobacillus denitrificans (53.85%)
|
13 | 9674 bp | 68.09 | 21.92 | 95.07 | |
RTP_02272018_0_2um_scaffold_1473
Order:
Hydrogenophilales (61.54%)
|
13 | 12532 bp | 62.33 | 24.59 | 95.78 | |
RTP_02272018_0_2um_scaffold_1582
Species:
GWE1_Thiobacillus_62_9_curated (66.67%)
|
12 | 13895 bp | 62.92 | 38.53 | 96.14 | |
RTP_02272018_0_2um_scaffold_1377
Species:
GWE1_Thiobacillus_62_9_curated (50%)
|
12 | 13454 bp | 60.09 | 53.69 | 91.14 | |
RTP_02272018_0_2um_scaffold_1285
Order:
Hydrogenophilales (66.67%)
|
12 | 14627 bp | 61.53 | 24.18 | 94.86 | |
RTP_02272018_0_2um_scaffold_1878
Order:
Hydrogenophilales (81.82%)
|
11 | 9581 bp | 61.12 | 27.38 | 87.33 | |
RTP_02272018_0_2um_scaffold_2272
Order:
Hydrogenophilales (70%)
|
10 | 8038 bp | 63.11 | 27.08 | 93.83 | |
RTP_02272018_0_2um_scaffold_3150
Order:
Hydrogenophilales (90%)
|
10 | 5671 bp | 60.52 | 53.43 | 77.53 | |
RTP_02272018_0_2um_scaffold_1791
Order:
Hydrogenophilales (80%)
|
10 | 10115 bp | 63.55 | 26.00 | 96.29 | |
RTP_02272018_0_2um_scaffold_3127
Species:
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (55.56%)
|
9 | 5725 bp | 57.94 | 22.61 | 95.11 | |
RTP_02272018_0_2um_scaffold_3036
Species:
GWE1_Thiobacillus_62_9_curated (50%)
|
8 | 5890 bp | 63.92 | 24.50 | 86.59 | |
RTP_02272018_0_2um_scaffold_1980
Order:
Hydrogenophilales (62.5%)
|
8 | 9078 bp | 62.36 | 22.04 | 75.58 | |
RTP_02272018_0_2um_scaffold_4398
Species:
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
|
8 | 4046 bp | 62.09 | 49.35 | 92.17 | |
RTP_02272018_0_2um_scaffold_3062
Order:
Hydrogenophilales (85.71%)
|
7 | 5842 bp | 65.70 | 23.24 | 93.72 | |
RTP_02272018_0_2um_scaffold_2063
Order:
Hydrogenophilales (71.43%)
|
7 | 8775 bp | 64.85 | 45.47 | 93.44 | |
RTP_02272018_0_2um_scaffold_1942
Species:
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (57.14%)
|
7 | 9222 bp | 62.69 | 36.86 | 83.25 | |
RTP_02272018_0_2um_scaffold_3445
Order:
Hydrogenophilales (57.14%)
|
7 | 5185 bp | 61.47 | 22.10 | 84.19 | |
RTP_02272018_0_2um_scaffold_2690
Order:
Hydrogenophilales (71.43%)
|
7 | 6761 bp | 62.89 | 24.32 | 90.56 | |
RTP_02272018_0_2um_scaffold_3026
Order:
Hydrogenophilales (71.43%)
|
7 | 5900 bp | 61.34 | 30.31 | 83.90 | |
RTP_02272018_0_2um_scaffold_2306
Species:
GWE1_Thiobacillus_62_9_curated (50%)
|
6 | 7944 bp | 61.20 | 24.38 | 86.03 | |
RTP_02272018_0_2um_scaffold_2961
Order:
Hydrogenophilales (100%)
|
6 | 6071 bp | 61.13 | 25.05 | 94.68 | |
RTP_02272018_0_2um_scaffold_3393
Order:
Hydrogenophilales (100%)
|
5 | 5273 bp | 60.67 | 23.78 | 94.50 | |
RTP_02272018_0_2um_scaffold_4663
Species:
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (60%)
|
5 | 3792 bp | 65.37 | 44.26 | 97.63 | |
RTP_02272018_0_2um_scaffold_8910
Species:
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (60%)
|
5 | 1912 bp | 56.38 | 40.72 | 79.86 | |
RTP_02272018_0_2um_scaffold_3524
Species:
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (60%)
|
5 | 5084 bp | 63.10 | 24.02 | 99.08 | |
RTP_02272018_0_2um_scaffold_6605
Order:
Hydrogenophilales (75%)
|
4 | 2632 bp | 63.91 | 21.94 | 89.25 | |
RTP_02272018_0_2um_scaffold_11385
Species:
GWE1_Thiobacillus_62_9_curated (100%)
|
4 | 1495 bp | 63.21 | 46.76 | 94.11 | |
RTP_02272018_0_2um_scaffold_7451
Species:
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (50%)
|
4 | 2310 bp | 59.48 | 22.79 | 85.97 | |
RTP_02272018_0_2um_scaffold_4186
Species:
Thiobacillus denitrificans (50%)
|
4 | 4252 bp | 58.73 | 22.65 | 96.03 | |
RTP_02272018_0_2um_scaffold_3025
Species:
GWE1_Thiobacillus_62_9_curated (50%)
|
4 | 5903 bp | 59.16 | 22.29 | 94.53 | |
RTP_02272018_0_2um_scaffold_7280
Order:
Hydrogenophilales (66.67%)
|
3 | 2377 bp | 58.06 | 26.19 | 96.80 | |
RTP_02272018_0_2um_scaffold_5073
Order:
Hydrogenophilales (100%)
|
3 | 3472 bp | 59.82 | 22.72 | 77.85 | |
RTP_02272018_0_2um_scaffold_16516
Order:
Hydrogenophilales (66.67%)
|
3 | 1029 bp | 64.43 | 20.99 | 75.51 | |
RTP_02272018_0_2um_scaffold_6064
Species:
GWE1_Thiobacillus_62_9_curated (66.67%)
|
3 | 2887 bp | 62.21 | 26.03 | 78.46 | |
RTP_02272018_0_2um_scaffold_5181
Species:
GWE1_Thiobacillus_62_9_curated (66.67%)
|
3 | 3393 bp | 57.32 | 27.23 | 91.60 | |
RTP_02272018_0_2um_scaffold_2946
Species:
Thiobacillus denitrificans (66.67%)
|
3 | 6127 bp | 64.55 | 28.55 | 92.54 | |
RTP_02272018_0_2um_scaffold_10679
Species:
Thiobacillus denitrificans (100%)
|
3 | 2583 bp | 62.80 | 55.34 | 102.44 | |
RTP_02272018_0_2um_scaffold_12427
Species:
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (50%)
|
2 | 1371 bp | 59.66 | 40.59 | 94.31 | |
RTP_02272018_0_2um_scaffold_15161
Species:
Thiobacillus denitrificans (50%)
|
2 | 1120 bp | 58.66 | 36.83 | 89.73 | |
RTP_02272018_0_2um_scaffold_10469
Species:
GWE1_Thiobacillus_62_9_curated (50%)
|
2 | 1623 bp | 56.50 | 22.92 | 75.60 | |
RTP_02272018_0_2um_scaffold_10730
Species:
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (100%)
|
2 | 1590 bp | 55.53 | 23.21 | 92.08 | |
RTP_02272018_0_2um_scaffold_13727
Species:
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (50%)
|
2 | 1239 bp | 57.71 | 42.98 | 99.03 | |
RTP_02272018_0_2um_scaffold_8340
Species:
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (100%)
|
2 | 2046 bp | 57.14 | 27.35 | 76.98 | |
RTP_02272018_0_2um_scaffold_8351
Species:
GWE1_Thiobacillus_62_9_curated (50%)
|
2 | 2043 bp | 66.32 | 19.31 | 100.44 | |
RTP_02272018_0_2um_scaffold_14923
Species:
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (50%)
|
2 | 1138 bp | 59.05 | 39.15 | 95.69 |