name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
RTP_02272018_0_2um_scaffold_317_1
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2..325)
|
shikimate dehydrogenase (EC:1.1.1.25); K00014 shikimate dehydrogenase [EC:1.1.1.25] id=12494773 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
shikimate dehydrogenase (EC:1.1.1.25)
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
RTP_02272018_0_2um_scaffold_317_2
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(391..846)
|
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000362C4DC
rhodanese-like protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
RTP_02272018_0_2um_scaffold_317_3
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1129..2538
|
L-glutamine synthetase (EC:6.3.1.2)
Glutamine synthetase id=1319869 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
|
|
RTP_02272018_0_2um_scaffold_317_4
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2620..3147
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037C1243
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
RTP_02272018_0_2um_scaffold_317_5
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3380..4453
|
PAS/PAC sensor signal transduction histidine kinase (EC:2.7.3.-)
histidine kinase n=1 Tax=Thiobacillus denitrificans RepID=UPI00037075F6
Tax=GWE1_Thiobacillus_62_9_curated
|
|
RTP_02272018_0_2um_scaffold_317_6
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4459..5877
|
nitrogen regulation protein NR(I) n=1 Tax=Thiobacillus denitrificans RepID=UPI000362CA28
Fis family transcriptional regulator
Tax=GWE1_Thiobacillus_62_9_curated
|
|
RTP_02272018_0_2um_scaffold_317_7
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5955..6275)
|
Glutaredoxin id=1319865 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
glutaredoxin-like protein
Tax=GWE1_Thiobacillus_62_9_curated
|
|
RTP_02272018_0_2um_scaffold_317_8
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6340..7467)
|
Putative uncharacterized protein id=1319864 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
|
|
RTP_02272018_0_2um_scaffold_317_9
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7454..8386)
|
Hpr(Ser) kinase/phosphatase (EC:2.7.1.-)
aldolase n=1 Tax=Thiobacillus thioparus RepID=UPI00036B6D47
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
RTP_02272018_0_2um_scaffold_317_10
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8690..9397)
|
hypothetical protein id=12494762 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
RTP_02272018_0_2um_scaffold_317_11
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9540..10388)
|
Release factor glutamine methyltransferase id=1319860 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
modification methylase HemK
Tax=GWE1_Thiobacillus_62_9_curated
|
|
RTP_02272018_0_2um_scaffold_317_12
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10389..11471)
|
peptide chain release factor 1 n=1 Tax=Thiobacillus denitrificans RepID=UPI000371A2CC
prfA; peptide chain release factor 1
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
RTP_02272018_0_2um_scaffold_317_13
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11468..12718)
|
hemA; glutamyl-tRNA reductase (EC:1.2.1.70); K02492 glutamyl-tRNA reductase [EC:1.2.1.70] id=12494759 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hemA; glutamyl-tRNA reductase (EC:1.2.1.70)
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
RTP_02272018_0_2um_scaffold_317_14
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12762..13679)
|
taurine catabolism dioxygenase n=1 Tax=Thiobacillus thioparus RepID=UPI00036767FB
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
RTP_02272018_0_2um_scaffold_317_15
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13680..14300)
|
Putative uncharacterized protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SG13_THIDA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ98443.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|
|
RTP_02272018_0_2um_scaffold_317_16
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14313..15161)
|
3-mercaptopyruvate sulfurtransferase (EC:2.8.1.2)
3-mercaptopyruvate sulfurtransferase n=1 Tax=Thiobacillus thioparus RepID=UPI00038229AB
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|
|
RTP_02272018_0_2um_scaffold_317_17
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15251..15583)
|
sulfite reductase subunit gamma n=1 Tax=Thiobacillus denitrificans RepID=UPI0003822197
sulfite reductase gamma chain
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
RTP_02272018_0_2um_scaffold_317_18
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15612..16271)
|
Putative uncharacterized protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SG16_THIDA
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
RTP_02272018_0_2um_scaffold_317_19
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16268..16489)
|
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000376705A
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
RTP_02272018_0_2um_scaffold_317_20
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16862..18166
|
sulfite reductase, dissimilatory-type subunit alpha (EC:1.8.99.3)
Sulfite reductase, dissimilatory-type alpha subunit id=1364812 bin=GWE1_T_denit_62_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
RTP_02272018_0_2um_scaffold_317_21
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18233..19303
|
sulfite reductase, dissimilatory-type subunit beta (EC:1.8.99.3); K11181 sulfite reductase, dissimilatory-type beta subunit [EC:1.8.99.3] id=12496405 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
sulfite reductase, dissimilatory-type subunit beta (EC:1.8.99.3)
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
RTP_02272018_0_2um_scaffold_317_22
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19395..19754
|
sulfurtransferase n=1 Tax=Thiobacillus denitrificans RepID=UPI000374B76E
DsrE protein
Tax=GWE1_Thiobacillus_62_9_curated
|
|
RTP_02272018_0_2um_scaffold_317_23
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19766..20161
|
sulfur oxidoreductase n=1 Tax=Thiobacillus thioparus RepID=UPI00037715B8
DsrF protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
RTP_02272018_0_2um_scaffold_317_24
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20172..20471
|
sulfur relay protein TusB/DsrH n=1 Tax=Thiobacillus thioparus RepID=UPI00037B3DCC
DsrH protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
RTP_02272018_0_2um_scaffold_317_25
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20494..20829
|
sulfur transfer protein TusE n=1 Tax=Thiobacillus denitrificans RepID=UPI00037846E6
sulfite reductase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
RTP_02272018_0_2um_scaffold_317_26
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20962..21702
|
Putative DsrM protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SG24_THIDA
DsrM protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
RTP_02272018_0_2um_scaffold_317_27
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21752..23284
|
Reductase, iron-sulfur binding subunit, putative id=1364805 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
reductase, iron-sulfur binding subunit
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
RTP_02272018_0_2um_scaffold_317_28
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23340..25307
|
glutamate synthase n=1 Tax=Thiobacillus denitrificans RepID=UPI00037195B3
glutamate synthase (NADPH) small subunit
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
RTP_02272018_0_2um_scaffold_317_29
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
25310..25807
|
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036BBDD8
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
|
|
RTP_02272018_0_2um_scaffold_317_30
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
25804..26583
|
4Fe-4S ferredoxin n=1 Tax=Thiobacillus denitrificans RepID=UPI00037758DA
iron-sulfur cluster protein
Tax=GWE1_Thiobacillus_62_9_curated
|