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RTP_02272018_0_2um_scaffold_662

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_02272018_0_2um_scaffold_662_1
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..158
DNA (156bp) protein (52aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035D7032
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_02272018_0_2um_scaffold_662_2
unknown

Not on your lists

169..357
DNA (189bp) protein (63aa)

This feature has no annotations

RTP_02272018_0_2um_scaffold_662_3
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(364..1206)
DNA (843bp) protein (281aa)
DNAase n=1 Tax=Thiobacillus thioparus RepID=UPI00037523B5
TatD related DNase
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_662_4
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1213..1878)
DNA (666bp) protein (222aa)
HflBKC-binding inner membrane protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00035CACED
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_662_5
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1998..2756)
DNA (759bp) protein (253aa)
Stomatin-like transmembrane protein, Band 7 protein id=1342789 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
SPFH domain-containing protein/band 7 family protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_662_6
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2749..4122)
DNA (1374bp) protein (458aa)
Probable transmembrane protein id=1342790 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
transmembrane protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_02272018_0_2um_scaffold_662_7
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4187..4864)
DNA (678bp) protein (226aa)
membrane protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003671BD0
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_662_8
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4987..5325)
DNA (339bp) protein (113aa)
cation:proton antiporter n=1 Tax=Thiobacillus denitrificans RepID=UPI0003677420
monovalent cation/H+ antiporter subunit G
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_02272018_0_2um_scaffold_662_9
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5336..5605)
DNA (270bp) protein (90aa)
Multisubunit Na+/H+ antiporter, subunit F id=1342795 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
multisubunit Na+/H+ antiporter subunit F
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_02272018_0_2um_scaffold_662_10
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5605..6153)
DNA (549bp) protein (183aa)
cation:proton antiporter n=1 Tax=Thiobacillus denitrificans RepID=UPI00037F5D13
monovalent cation/H+ antiporter subunit E
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_02272018_0_2um_scaffold_662_11
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6150..7667)
DNA (1518bp) protein (506aa)
monovalent cation/H+ antiporter subunit D (EC:1.6.99.5)
NADH dehydrogenase (Quinone) id=1342797 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_662_12
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7664..8008)
DNA (345bp) protein (115aa)
cation:proton antiporter n=1 Tax=Thiobacillus denitrificans RepID=UPI0003763921
monovalent cation/H+ antiporter subunit C
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_662_13
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8008..10806)
DNA (2799bp) protein (933aa)
monovalent cation/H+ antiporter subunit A (EC:1.6.99.5)
cation:proton antiporter n=1 Tax=Thiobacillus denitrificans RepID=UPI000367A2E8
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_02272018_0_2um_scaffold_662_14
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11054..12589
DNA (1536bp) protein (512aa)
Sulphate transporter id=1342801 bin=GWE1_T_denit_62_9 species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
sulfate transporter
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_662_15
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12751..13605
DNA (855bp) protein (285aa)
UspA domain-containing protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AI18_9PROT
UspA domain-containing protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_02272018_0_2um_scaffold_662_16
CG_Gallio_03, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13690..15330
DNA (1641bp) protein (547aa)
Sodium/hydrogen exchanger n=1 Tax=Alcanivorax pacificus W11-5 RepID=K2HF67_9GAMM
sodium/hydrogen exchanger
Tax=CG_Gallio_03
RTP_02272018_0_2um_scaffold_662_17
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15327..16223
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AM41_9PROT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAN35804.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
RTP_02272018_0_2um_scaffold_662_18
R_Gallionellales_57_47, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16220..17224
DNA (1005bp) protein (335aa)
Ca2+:cation antiporter, CaCA family id=1329028 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Ca2+/H+ antiporter
Tax=RIFCSPLOWO2_02_FULL_Gallionellales_57_47_curated
RTP_02272018_0_2um_scaffold_662_19
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17214..19886
DNA (2673bp) protein (891aa)
Cation transport ATPases n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P2J2_AROAE
Cation transport ATPases {ECO:0000313|EMBL:CAI08472.1}; TaxID=76114 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum aromaticum (strain EbN1) (Azoarcus sp. (strain EbN1)).;"
HAD superfamily P-type ATPase
RTP_02272018_0_2um_scaffold_662_20
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20224..20703
DNA (480bp) protein (160aa)
Uncharacterized protein id=1342802 bin=GWE1_T_denit_62_9 species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
PfkB
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_662_21
CG_Rhodof_03, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20703..21140
DNA (438bp) protein (146aa)
PfkB; K00847 fructokinase [EC:2.7.1.4] id=12493773 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
PfkB domain-containing protein
Tax=CG_Rhodof_03
RTP_02272018_0_2um_scaffold_662_22
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21190..22095
DNA (906bp) protein (302aa)
Mechanosensitive ion channel id=1329035 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
mechanosensitive ion channel MscS
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_662_23
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22087..24783)
DNA (2697bp) protein (899aa)
glutamate-ammonia-ligase adenylyltransferase (EC:2.7.7.42)
glutamine-synthetase adenylyltransferase n=1 Tax=Thiobacillus denitrificans RepID=UPI0003710D6A
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_662_24
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24866..26833
DNA (1968bp) protein (656aa)
acetyl-CoA synthetase (EC:6.2.1.1)
Acetyl-coenzyme A synthetase id=1348264 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_662_25
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26927..27316
DNA (390bp) protein (130aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036BEDAB
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_662_26
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27836..29668
DNA (1833bp) protein (611aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000361448D
serine protease
Serine protease, subtilase family {ECO:0000313|EMBL:AAZ96460.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RTP_02272018_0_2um_scaffold_662_27
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29720..30289)
DNA (570bp) protein (190aa)
FMN reductase n=1 Tax=Thiobacillus thioparus RepID=UPI000370E382
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_02272018_0_2um_scaffold_662_28
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30484..30882
DNA (399bp) protein (133aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037C3280
RNA-binding S4 protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_662_29
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30961..34800
DNA (3840bp) protein (1280aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037CA749
Uncharacterized protein {ECO:0000313|EMBL:AAZ96463.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
hypothetical protein
RTP_02272018_0_2um_scaffold_662_30
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34816..35763
DNA (948bp) protein (316aa)
Carbon-nitrogen hydrolase n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SLE9_THIDA
carbon-nitrogen hydrolase
Carbon-nitrogen hydrolase {ECO:0000313|EMBL:AAZ96464.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
Displaying items 1-30 of 35 in total

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