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RTP_02272018_0_2um_scaffold_697

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Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_02272018_0_2um_scaffold_697_1
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..587
DNA (585bp) protein (195aa)
Pilus retraction protein PilT id=1358218 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
pilus retraction ATPase PilT
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_02272018_0_2um_scaffold_697_2
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

598..1725
DNA (1128bp) protein (376aa)
Pilus retraction protein PilT id=1358217 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
pilus retraction protein PilT
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_697_3
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1903..2172)
DNA (270bp) protein (90aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036F0A7F
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_697_4
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2181..3422)
DNA (1242bp) protein (414aa)
N6-adenine-specific DNA methylase id=1358215 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
N-6 adenine-specific DNA methylase
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_697_5
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3441..3824)
DNA (384bp) protein (128aa)
transmembrane protein; K08973 putative membrane protein id=12494161 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
transmembrane protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_02272018_0_2um_scaffold_697_6
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3853..4389
DNA (537bp) protein (179aa)
alkyl hydroperoxide reductase id=12494162 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
alkyl hydroperoxide reductase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_02272018_0_2um_scaffold_697_7
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4386..4604
DNA (219bp) protein (73aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000378A97E
SlyX protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_697_8
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4611..5066)
DNA (456bp) protein (152aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037CD3D9
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_02272018_0_2um_scaffold_697_9
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5074..6738)
DNA (1665bp) protein (555aa)
ABC transporter ATP-binding protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003718F1E
ABC transporter ATP-binding protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_02272018_0_2um_scaffold_697_10
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6759..7010)
DNA (252bp) protein (84aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000381767B
Uncharacterized protein {ECO:0000313|EMBL:EIJ35143.1}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
RTP_02272018_0_2um_scaffold_697_11
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7007..7501)
DNA (495bp) protein (165aa)
thioredoxin n=1 Tax=Thiobacillus thioparus RepID=UPI00037EE57F
thioredoxin
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_697_12
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7517..8068)
DNA (552bp) protein (184aa)
carbonic anhydrase id=12494168 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
carbonic anhydrase
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_02272018_0_2um_scaffold_697_13
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8136..10172
DNA (2037bp) protein (679aa)
oligopeptidase A (EC:3.4.24.70)
oligopeptidase A n=1 Tax=Thiobacillus thioparus RepID=UPI00037060C3
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_02272018_0_2um_scaffold_697_14
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10310..10861
DNA (552bp) protein (184aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036B92D7
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_02272018_0_2um_scaffold_697_15
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10950..11723
DNA (774bp) protein (258aa)
exodeoxyribonuclease III (EC:3.1.11.2)
Exodeoxyribonuclease III xth id=1358715 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_697_16
Sideroxydans lithotrophicus, Sideroxydans, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11912..13036)
DNA (1125bp) protein (375aa)
Filamentation induced by cAMP protein Fic n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CMJ6_SIDLE
filamentation induced by cAMP protein Fic
Filamentation induced by cAMP protein Fic {ECO:0000313|EMBL:ADE12668.1}; TaxID=580332 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Sideroxydans.;" source="Sideroxydans lithotrophicus (strain ES-1).;"
RTP_02272018_0_2um_scaffold_697_17
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13182..13811)
DNA (630bp) protein (210aa)
DNA-3-methyladenine glycosylase n=1 Tax=Thiobacillus denitrificans RepID=UPI00035F3C80
yfjP_[H]; HhH-GPD base excision DNA repair family protein; Probable 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_697_18
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13808..15259)
DNA (1452bp) protein (484aa)
RNAse G (EC:3.1.4.-)
Ribonuclease E and G n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SG66_THIDA
Ribonuclease E and G {ECO:0000313|EMBL:AAZ98390.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RTP_02272018_0_2um_scaffold_697_19
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15350..15961)
DNA (612bp) protein (204aa)
septum formation inhibitor Maf n=1 Tax=Thiobacillus denitrificans RepID=UPI00036C9B3C
maf; Maf-like protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_697_20
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15979..16416)
DNA (438bp) protein (146aa)
50S rRNA methyltransferase n=1 Tax=Thiobacillus denitrificans RepID=UPI00038169E6
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_02272018_0_2um_scaffold_697_21
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16450..16809)
DNA (360bp) protein (120aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003611A43
Iojap-like protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_02272018_0_2um_scaffold_697_22
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16806..17453)
DNA (648bp) protein (216aa)
nicotinate-nucleotide adenylyltransferase (EC:2.7.7.18)
nicotinic acid mononucleotide adenylyltransferase n=1 Tax=Thiobacillus denitrificans RepID=UPI00037C9FE7
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_02272018_0_2um_scaffold_697_23
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17457..18734)
DNA (1278bp) protein (426aa)
proA; gamma-glutamyl phosphate reductase (EC:1.2.1.41)
gamma-glutamyl phosphate reductase n=1 Tax=Thiobacillus denitrificans RepID=UPI00036924DC
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_02272018_0_2um_scaffold_697_24
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18724..19761)
DNA (1038bp) protein (346aa)
DNA polymerase III subunit delta (EC:2.7.7.7)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036161C1
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_02272018_0_2um_scaffold_697_25
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19758..20255)
DNA (498bp) protein (166aa)
Putative lipoprotein B transmembrane id=1320909 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
lipoprotein B transmembrane
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_697_26
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(20252..22903)
DNA (2652bp) protein (884aa)
leucyl-tRNA synthetase n=1 Tax=Thiobacillus thioparus RepID=UPI000368467C
leucyl-tRNA synthetase
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_697_27
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23076..23606
DNA (531bp) protein (177aa)
Putative uncharacterized protein id=1320911 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_697_28
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23677..24564
DNA (888bp) protein (296aa)
cbbP; phosphoribulokinase (EC:2.7.1.19)
phosphoribulokinase n=1 Tax=Thiobacillus thioparus RepID=UPI00035F3A81
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_02272018_0_2um_scaffold_697_29
RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24676..24870)
DNA (195bp) protein (65aa)
Putative uncharacterized protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47IZ3_DECAR
hypothetical protein
Tax=RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated
RTP_02272018_0_2um_scaffold_697_30
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25091..25288)
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5NZA4_AROAE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI09610.1}; TaxID=76114 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum aromaticum (strain EbN1) (Azoarcus sp. (strain EbN1)).;"
Displaying items 1-30 of 33 in total

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