ggKbase home page

RTP_02272018_0_2um_scaffold_764

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_02272018_0_2um_scaffold_764_1
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..1072
DNA (1071bp) protein (357aa)
Putative tetrathionate reductase subunit C n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SI40_THIDA
tetrathionate reductase subunit C
Putative tetrathionate reductase subunit C {ECO:0000313|EMBL:AAZ97693.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RTP_02272018_0_2um_scaffold_764_2
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1083..4172
DNA (3090bp) protein (1030aa)
Putative tetrathionate reductase, subunit A n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SI39_THIDA
tetrathionate reductase subunit A
Putative tetrathionate reductase, subunit A {ECO:0000313|EMBL:AAZ97694.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RTP_02272018_0_2um_scaffold_764_3
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4184..4615
DNA (432bp) protein (144aa)
ATP synthase epsilon chain 1 n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=ATPE1_THIDA
H+-transporting two-sector ATPase, delta/subunit epsilon
ATP synthase epsilon chain 1 {ECO:0000255|HAMAP-Rule:MF_00530}; ATP synthase F1 sector epsilon subunit 1 {ECO:0000255|HAMAP-Rule:MF_00530}; F-ATPase epsilon subunit 1 {ECO:0000255|HAMAP-Rule:MF_00530}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RTP_02272018_0_2um_scaffold_764_4
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4644..5990
DNA (1347bp) protein (449aa)
Putative uncharacterized protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SHU2_THIDA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ97791.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RTP_02272018_0_2um_scaffold_764_5
Thermodesulfovibrio yellowstonii, Thermodesulfovibrio, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

6096..6518
DNA (423bp) protein (141aa)
Universal stress protein n=1 Tax=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) RepID=B5YFX7_THEYD
hypothetical protein
Universal stress protein {ECO:0000256|PIRNR:PIRNR006276}; TaxID=289376 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Thermodesulfovibrio.;" source="Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 /; YP87).;"
RTP_02272018_0_2um_scaffold_764_6
unknown

Not on your lists

6538..6693
DNA (156bp) protein (52aa)

This feature has no annotations

RTP_02272018_0_2um_scaffold_764_7
Desulfotomaculum hydrothermale, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6720..8096
DNA (1377bp) protein (459aa)
Uncharacterized protein n=1 Tax=Desulfotomaculum hydrothermale Lam5 = DSM 18033 RepID=K8DX45_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO07074.1}; TaxID=1121428 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum hydrothermale Lam5 = DSM 18033.;"
RTP_02272018_0_2um_scaffold_764_8
unknown

Not on your lists

8182..8631
DNA (450bp) protein (150aa)

This feature has no annotations

RTP_02272018_0_2um_scaffold_764_9
unknown

Not on your lists

8635..9204
DNA (570bp) protein (190aa)

This feature has no annotations

RTP_02272018_0_2um_scaffold_764_10
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9659..9835
DNA (177bp) protein (59aa)
Excinuclease ABC subunit A {ECO:0000313|EMBL:GAO34634.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
plasmid maintenance system killer protein; K07334 proteic killer suppression protein id=12498135 bin=THIO_MID species=Oxalobacter formigenes genus=Oxalobacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein
RTP_02272018_0_2um_scaffold_764_11
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9848..10156
DNA (309bp) protein (103aa)
plasmid maintenance system antidote protein id=12498134 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
Virulence factor {ECO:0000313|EMBL:GAO34635.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
plasmid maintenance system antidote protein
RTP_02272018_0_2um_scaffold_764_12
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10505..11134)
DNA (630bp) protein (210aa)
Two Component Transcriptional Regulator, LuxR family n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SI37_THIDA
LuxR family transcriptional regulator
Two Component Transcriptional Regulator, LuxR family {ECO:0000313|EMBL:AAZ97696.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RTP_02272018_0_2um_scaffold_764_13
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11118..12944)
DNA (1827bp) protein (609aa)
histidine kinase (EC:2.7.3.-)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
Histidine Kinase n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SI36_THIDA
RTP_02272018_0_2um_scaffold_764_14
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13259..13723)
DNA (465bp) protein (155aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037F219C
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_02272018_0_2um_scaffold_764_15
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13720..14766)
DNA (1047bp) protein (349aa)
cytochrome C n=1 Tax=Thiobacillus denitrificans RepID=UPI00037CE718
cytochrome c
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_02272018_0_2um_scaffold_764_16
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14962..16245
DNA (1284bp) protein (428aa)
MgtC family protein id=1345797 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
MgtC family protein
MgtC family protein {ECO:0000313|EMBL:AAZ96875.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RTP_02272018_0_2um_scaffold_764_17
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16533..17888
DNA (1356bp) protein (452aa)
Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase component n=1 Tax=Rhodanobacter denitrificans RepID=I4WMY9_9GAMM
pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase component
Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase component {ECO:0000313|EMBL:AGG90848.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
RTP_02272018_0_2um_scaffold_764_18
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18012..19061
DNA (1050bp) protein (350aa)
peptide chain release factor 2 n=1 Tax=Thiobacillus thioparus RepID=UPI00037E3C12
peptide chain release factor 2
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_764_19
RifOxyA12_full_Lentisphaerae_48_11_curated, Lentisphaerae, Bacteria

Not on your lists

19127..19351
DNA (225bp) protein (75aa)
hypothetical protein n=1 Tax=Thioalkalivibrio RepID=UPI0003609E4E
addiction module proein
Tax=RifOxyA12_full_Lentisphaerae_48_11_curated
RTP_02272018_0_2um_scaffold_764_20
Candidatus Kuenenia stuttgartiensis, Candidatus Kuenenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

19348..19641
DNA (294bp) protein (98aa)
hypothetical protein n=1 Tax=Thioalkalivibrio RepID=UPI0003664F2E
Putative uncharacterized protein {ECO:0000313|EMBL:CAJ71496.1}; TaxID=174633 species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Kuenenia.;" source="Candidatus Kuenenia stuttgartiensis.;"
hypothetical protein
RTP_02272018_0_2um_scaffold_764_21
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19732..22449
DNA (2718bp) protein (906aa)
Peptidase M, neutral zinc metallopeptidases, zinc-binding site id=1345795 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
pepN; aminopeptidase
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_764_22
alpha proteobacterium U9-1i, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22557..23705)
DNA (1149bp) protein (383aa)
hypothetical protein n=1 Tax=Sphingobium yanoikuyae RepID=UPI000262C624
Uncharacterized protein {ECO:0000313|EMBL:GAM97388.1}; TaxID=1605283 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium U9-1i.;"
RTP_02272018_0_2um_scaffold_764_23
RBG_16_Gallionellales_57_15_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23981..24310)
DNA (330bp) protein (110aa)
hypothetical protein id=12494655 bin=THIO_HI species=Burkholderia sp. SJ98 genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
Tax=RBG_16_Gallionellales_57_15_curated
Displaying 23 items

View Taxonomy