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RTP_02272018_0_2um_scaffold_902

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_02272018_0_2um_scaffold_902_1
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..682)
DNA (681bp) protein (227aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000361616F
glycosyltransferase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_02272018_0_2um_scaffold_902_2
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(660..1379)
DNA (720bp) protein (240aa)
Membrane protein, putative id=1348030 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_02272018_0_2um_scaffold_902_3
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1380..2129)
DNA (750bp) protein (250aa)
dolichol-phosphate mannosyltransferase n=1 Tax=Thiobacillus thioparus RepID=UPI000377758F
group 2 family glycosyl transferase
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_02272018_0_2um_scaffold_902_trna_1
unknown

Not on your lists

comp(2158..2244)
DNA (87bp)
transferRNA Ser
RTP_02272018_0_2um_scaffold_902_4
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2347..2934)
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GRP7_THISH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL72601.1}; Flags: Precursor;; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
RTP_02272018_0_2um_scaffold_902_5
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2931..3458)
DNA (528bp) protein (176aa)
hypothetical protein n=1 Tax=Methylotenera sp. 1P/1 RepID=UPI00035F2294
alkyl hydroperoxide reductase
Tax=RBG_16_Gamma2_65_34_curated
RTP_02272018_0_2um_scaffold_902_6
RBG_16_Gamma2_64_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3455..4285)
DNA (831bp) protein (277aa)
hypothetical protein, partial n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI0003703ADC
hypothetical protein
Tax=RBG_16_Gamma2_64_10_curated
RTP_02272018_0_2um_scaffold_902_7
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4435..4950
DNA (516bp) protein (172aa)
molecular chaperone GrpE n=1 Tax=Thiobacillus thioparus RepID=UPI00036A8592
molecular chaperone protein GrpE
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_02272018_0_2um_scaffold_902_8
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5038..6954
DNA (1917bp) protein (639aa)
molecular chaperone protein DnaK; K04043 molecular chaperone DnaK id=12493086 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
molecular chaperone DnaK
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_902_9
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7039..8151
DNA (1113bp) protein (371aa)
Chaperone protein DnaJ id=1348026 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
molecular chaperone protein DnaJ
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_902_10
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8307..9077)
DNA (771bp) protein (257aa)
DNAase n=1 Tax=Thiobacillus thioparus RepID=UPI00038283A3
TatD-related deoxyribonuclease
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_02272018_0_2um_scaffold_902_11
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9143..9514)
DNA (372bp) protein (124aa)
type IV pilus assembly protein PilZ; K02676 type IV pilus assembly protein PilZ id=12493089 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
type IV pilus assembly protein PilZ
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_02272018_0_2um_scaffold_902_12
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9527..10510)
DNA (984bp) protein (328aa)
DNA polymerase III subunit delta' (EC:2.7.7.7)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000380C29C
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_902_13
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10507..11118)
DNA (612bp) protein (204aa)
thymidylate kinase (EC:2.7.4.9)
thymidylate kinase n=1 Tax=Thiobacillus denitrificans RepID=UPI00036C32EA
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_02272018_0_2um_scaffold_902_14
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11115..12107)
DNA (993bp) protein (331aa)
aminodeoxychorismate lyase n=1 Tax=Thiobacillus denitrificans RepID=UPI00037B1D39
aminodeoxychorismate lyase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_02272018_0_2um_scaffold_902_15
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12091..12900)
DNA (810bp) protein (270aa)
aminodeoxychorismate lyase (EC:4.1.3.38)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003709FC3
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_02272018_0_2um_scaffold_902_16
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12897..14228)
DNA (1332bp) protein (444aa)
Anthranilate synthase id=1359358 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_902_17
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14251..15483)
DNA (1233bp) protein (411aa)
3-oxoacyl-ACP synthase (EC:2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase 2 id=1359359 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_902_18
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15511..15744)
DNA (234bp) protein (78aa)
acyl carrier protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037CB1D8
acyl carrier protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_02272018_0_2um_scaffold_902_19
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15832..16572)
DNA (741bp) protein (247aa)
3-oxoacyl-ACP reductase (EC:1.1.1.100)
3-oxoacyl-(Acyl-carrier-protein) reductase id=1359361 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_02272018_0_2um_scaffold_902_20
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16582..17520)
DNA (939bp) protein (313aa)
ACP S-malonyltransferase (EC:2.3.1.39)
malonyl CoA-ACP transacylase n=1 Tax=Thiobacillus thioparus RepID=UPI000365BE4B
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_902_21
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17532..18491)
DNA (960bp) protein (320aa)
3-oxoacyl-ACP synthase (EC:2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000255|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000255|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000255|HAMAP-Rule:MF_01815}; Beta-ketoacyl-ACP synthase III {ECO:0000255|HAMAP-Rule:MF_01815}; Short=KAS III {ECO:0000255|HAMAP-Rule:MF_01815};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
3-oxoacyl-ACP synthase n=1 Tax=Thiobacillus denitrificans RepID=UPI0003612939
RTP_02272018_0_2um_scaffold_902_22
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18488..19507)
DNA (1020bp) protein (340aa)
Phosphate acyltransferase {ECO:0000255|HAMAP-Rule:MF_00019}; EC=2.3.1.n2 {ECO:0000255|HAMAP-Rule:MF_00019};; Acyl-ACP phosphotransacylase {ECO:0000255|HAMAP-Rule:MF_00019}; Acyl-[acyl-carrier-protein]--phosphate acyltransferase {ECO:0000255|HAMAP-Rule:MF_00019}; Phosphate-acyl-ACP acyltransferase {ECO:0000255|HAMAP-Rule:MF_00019}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
phosphate acyltransferase n=1 Tax=Thiobacillus denitrificans RepID=UPI0003604250
glycerol-3-phosphate acyltransferase PlsX
RTP_02272018_0_2um_scaffold_902_23
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(19576..19755)
DNA (180bp) protein (60aa)
50S ribosomal protein L32 id=1360988 bin=GWE1_T_denit_62_9 species=unknown genus=unknown taxon_order=Methylophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
rpmF; 50S ribosomal protein L32
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_902_24
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19776..20222)
DNA (447bp) protein (149aa)
Putative uncharacterized protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SIM1_THIDA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ97507.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RTP_02272018_0_2um_scaffold_902_25
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20375..20833
DNA (459bp) protein (153aa)
pyruvate carboxylase subunit A (EC:6.3.4.14)
acetyl-CoA carboxylase subunit alpha n=1 Tax=Thiobacillus thioparus RepID=UPI0003618A3C
Tax=GWE1_Thiobacillus_62_9_curated
Displaying 26 items

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