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RTP_02272018_0_2um_scaffold_980

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_02272018_0_2um_scaffold_980_1
GWA2_Gallionellales_54_124_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..270)
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Burkholderia sp. Ch1-1 RepID=I2IM64_9BURK
hypothetical protein
Tax=GWA2_Gallionellales_54_124_curated
RTP_02272018_0_2um_scaffold_980_2
unknown

Not on your lists

472..648
DNA (177bp) protein (59aa)

This feature has no annotations

RTP_02272018_0_2um_scaffold_980_3
Candidatus Regiella insecticola, Candidatus Regiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(876..1148)
DNA (273bp) protein (91aa)
Addiction module n=1 Tax=Candidatus Regiella insecticola LSR1 RepID=E0WU55_9ENTR
Addiction module {ECO:0000313|EMBL:EFL91461.1}; TaxID=663321 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; aphid secondary symbionts; Candidatus Regiella.;" source="Candidatus Regiella insecticola LSR1.;"
plasmid stability protein
RTP_02272018_0_2um_scaffold_980_4
R_Gammaproteobacteria_56_15, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1148..1390)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6QQJ0_9ZZZZ
plasmid-like protein
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_56_15_curated
RTP_02272018_0_2um_scaffold_980_5
GWA2_Gallionellales_54_124_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2338..2766)
DNA (429bp) protein (143aa)
Transcriptional regulator, XRE family n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CS49_SIDLE
XRE family transcriptional regulator
Tax=GWA2_Gallionellales_54_124_curated
RTP_02272018_0_2um_scaffold_980_6
GWA2_Gallionellales_54_124_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2769..3071)
DNA (303bp) protein (101aa)
Putative uncharacterized protein n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CS50_SIDLE
hypothetical protein
Tax=GWA2_Gallionellales_54_124_curated
RTP_02272018_0_2um_scaffold_980_7
unknown

Not on your lists

comp(3450..3578)
DNA (129bp) protein (43aa)

This feature has no annotations

RTP_02272018_0_2um_scaffold_980_8
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4077..4358
DNA (282bp) protein (94aa)
Putative uncharacterized protein n=2 Tax=Thiomonas RepID=D5X0B2_THIK1
hypothetical protein
Putative Methionine repressor-like {ECO:0000313|EMBL:CAZ88178.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
RTP_02272018_0_2um_scaffold_980_9
Burkholderia andropogonis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4355..4843
DNA (489bp) protein (163aa)
Putative GCN5-related N-acetyltransferase n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CQ97_THIA3
GCN5 family acetyltransferase {ECO:0000313|EMBL:KKB60828.1}; TaxID=28092 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia andropogonis.;"
putative GCN5-related N-acetyltransferase
RTP_02272018_0_2um_scaffold_980_10
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5670..5984
DNA (315bp) protein (105aa)
Prevent-host-death family protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RU48_ACCPU
prevent-host-death family protein
Tax=GWA2_Rhodocyclales_65_20_curated
RTP_02272018_0_2um_scaffold_980_11
Sulfuritalea hydrogenivorans, Sulfuritalea, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5984..6298
DNA (315bp) protein (105aa)
Plasmid stabilization system n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RU47_ACCPU
plasmid stabilization system
Plasmid stabilization system {ECO:0000313|EMBL:BAO30886.1}; TaxID=1223802 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfuritalea.;" source="Sulfuritalea hydrogenivorans sk43H.;"
RTP_02272018_0_2um_scaffold_980_12
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6710..7396)
DNA (687bp) protein (229aa)
hisG; ATP phosphoribosyltransferase (EC:2.4.2.17)
ATP phosphoribosyltransferase n=1 Tax=Thiobacillus denitrificans RepID=UPI00037A5953
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_02272018_0_2um_scaffold_980_13
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7555..8808)
DNA (1254bp) protein (418aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Thiobacillus thioparus RepID=UPI000378ADE6
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_980_14
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8809..9045)
DNA (237bp) protein (79aa)
hypothetical protein id=12497914 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_02272018_0_2um_scaffold_980_15
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9061..9816)
DNA (756bp) protein (252aa)
ABC-2 type transport system permease protein id=1334753 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
ABC-2 type transport system permease
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_980_16
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10034..10942)
DNA (909bp) protein (303aa)
ABC-type multidrug transporter ATPase id=1334754 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
ABC-type multidrug transporter ATPase
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_980_17
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10939..11214)
DNA (276bp) protein (92aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000366E6D6
NTP binding protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_02272018_0_2um_scaffold_980_18
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11214..11849)
DNA (636bp) protein (212aa)
signal peptide protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035E3864
signal peptide protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_980_19
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11914..13275)
DNA (1362bp) protein (454aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037A237E
outer membrane protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_980_20
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13272..13739)
DNA (468bp) protein (156aa)
ABC transporter substrate-binding protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000382018E
ABC transporter substrate-binding protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_02272018_0_2um_scaffold_980_21
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13740..14528)
DNA (789bp) protein (263aa)
ABC transporter permease n=1 Tax=Thiobacillus denitrificans RepID=UPI000378D033
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ97852.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RTP_02272018_0_2um_scaffold_980_22
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14521..15369)
DNA (849bp) protein (283aa)
ABC transporter ATPase id=1334759 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
ABC transporter ATPase
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_980_23
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15424..15879)
DNA (456bp) protein (152aa)
Putative uncharacterized protein id=1334760 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_980_24
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16011..17378)
DNA (1368bp) protein (456aa)
cysteinyl-tRNA synthetase (EC:6.1.1.16); K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16] id=12494681 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
cysteinyl-tRNA synthetase (EC:6.1.1.16)
Cysteine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00041}; EC=6.1.1.16 {ECO:0000255|HAMAP-Rule:MF_00041};; Cysteinyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00041}; Short=CysRS {ECO:0000255|HAMAP-Rule:MF_00041};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RTP_02272018_0_2um_scaffold_980_25
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17497..18447
DNA (951bp) protein (317aa)
TPR repeat-containing protein id=12497926 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
TPR repeat-containing protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_02272018_0_2um_scaffold_980_26
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18453..19688
DNA (1236bp) protein (412aa)
Uncharacterized protein id=1329860 bin=GWE1_T_denit_62_9 species=Azospira oryzae genus=Azospira taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_02272018_0_2um_scaffold_980_27
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19705..20196
DNA (492bp) protein (164aa)
peptidyl-prolyl cis-trans isomerase B (EC:5.2.1.8)
cyclophilin n=1 Tax=Thiobacillus thioparus RepID=UPI0003604044
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_980_28
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20202..20954
DNA (753bp) protein (251aa)
UDP-2,3-diacylglucosamine hydrolase (EC:3.6.1.-)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003778791
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_980_29
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20949..21602)
DNA (654bp) protein (218aa)
Putative uncharacterized protein id=1329863 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_980_30
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21602..22771)
DNA (1170bp) protein (390aa)
O-succinylhomoserine sulfhydrylase (EC:2.5.1.48)
O-succinylhomoserine sulfhydrylase id=1329864 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
Displaying items 1-30 of 41 in total

View Taxonomy