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RTP_02272018_0_2um_scaffold_1913

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_02272018_0_2um_scaffold_1913_1
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2..1249)
DNA (1248bp) protein (416aa)
general secretion protein E n=1 Tax=Thiobacillus denitrificans RepID=UPI00035E78D4
type II secretion system protein E
Type II secretion system protein E {ECO:0000313|EMBL:AAZ97387.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RTP_02272018_0_2um_scaffold_1913_2
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1246..2430)
DNA (1185bp) protein (395aa)
type II secretion system protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00035EB2C2
type II secretion system protein F
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_02272018_0_2um_scaffold_1913_3
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2443..2871)
DNA (429bp) protein (143aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000375187C
type II secretion systen protein G
Type II secretion systen protein G {ECO:0000313|EMBL:AAZ97385.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RTP_02272018_0_2um_scaffold_1913_4
unknown

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3261..3464
DNA (204bp) protein (68aa)

This feature has no annotations

RTP_02272018_0_2um_scaffold_1913_5
Ferriphaselus amnicola, Ferriphaselus, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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3511..3885
DNA (375bp) protein (125aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000368FA6E
YHS domain protein {ECO:0000313|EMBL:GAO33956.1}; TaxID=1188319 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Ferriphaselus.;" source="Ferriphaselus amnicola.;"
YHS domain-containing protein
RTP_02272018_0_2um_scaffold_1913_6
unknown

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4091..4267
DNA (177bp) protein (59aa)

This feature has no annotations

RTP_02272018_0_2um_scaffold_1913_7
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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4412..4597
DNA (186bp) protein (62aa)
Heavy-metal transporting P-type ATPase id=3897379 bin=GWC2_Nitrospirae-rel_56_14 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
ATPase P
Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
RTP_02272018_0_2um_scaffold_1913_8
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

4802..5143
DNA (342bp) protein (114aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Marinobacter manganoxydans MnI7-9 RepID=G6YN00_9ALTE
Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
RTP_02272018_0_2um_scaffold_1913_9
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

5163..5906
DNA (744bp) protein (248aa)
ferredoxin-NADP reductase n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI000361A1BE
oxidoreductase FAD/NAD(P)-binding domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
RTP_02272018_0_2um_scaffold_1913_10
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6051..9074
DNA (3024bp) protein (1008aa)
dTDP-glucose 4,6-dehydratase (EC:4.2.1.46)
dTDP-glucose 4,6-dehydratase {ECO:0000313|EMBL:CCA93149.1}; EC=4.2.1.46 {ECO:0000313|EMBL:CCA93149.1};; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. PP1Y.;"
dTDP-glucose 4,6-dehydratase n=1 Tax=Novosphingobium sp. PP1Y RepID=F6INZ7_9SPHN
RTP_02272018_0_2um_scaffold_1913_11
unknown

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9207..9410
DNA (204bp) protein (68aa)

This feature has no annotations

Displaying 11 items

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