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RTP_02272018_0_2um_scaffold_1958

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_02272018_0_2um_scaffold_1958_1
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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2..715
DNA (714bp) protein (238aa)
diguanylate cyclase/phosphodiesterase id=12495183 bin=THIO_HI species=unknown genus=Methylotenera taxon_order=Methylophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
diguanylate cyclase/phosphodiesterase
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_1958_2
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(828..1205)
DNA (378bp) protein (126aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036CEF00
signal peptide protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_1958_3

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comp(1432..4089)
DNA (2658bp) protein (886aa)
Aconitate hydratase (Citrate hydro-lyase) (Aconitase) {ECO:0000313|EMBL:CBI09861.1}; EC=4.2.1.3 {ECO:0000313|EMBL:CBI09861.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
acnA; aconitate hydratase (EC:4.2.1.3)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00035F58A9
RTP_02272018_0_2um_scaffold_1958_4
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4169..4519)
DNA (351bp) protein (117aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036D425C
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ96845.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RTP_02272018_0_2um_scaffold_1958_5
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4528..6039)
DNA (1512bp) protein (504aa)
lysyl-tRNA synthetase, class-2; K04567 lysyl-tRNA synthetase, class II [EC:6.1.1.6] id=12494622 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
lysyl-tRNA synthetase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_02272018_0_2um_scaffold_1958_6
RBG_16_Betaproteobacteria_56_24_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6055..6489)
DNA (435bp) protein (145aa)
Ribonuclease VapC n=1 Tax=Thioalkalivibrio thiocyanoxidans ARh 4 RepID=G4DLK8_9GAMM
twitching motility protein PilT
Tax=RBG_16_Betaproteobacteria_56_24_curated
RTP_02272018_0_2um_scaffold_1958_7
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6489..6734)
DNA (246bp) protein (82aa)
prevent-host-death protein id=12494620 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
prevent-host-death protein
Prevent-host-death protein {ECO:0000313|EMBL:AAZ96848.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RTP_02272018_0_2um_scaffold_1958_8
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6841..8637
DNA (1797bp) protein (599aa)
ATP-dependent DNA helicase RecQ n=1 Tax=Thiobacillus thioparus RepID=UPI00036ECAF1
ATP-dependent DNA helicase RecQ
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_02272018_0_2um_scaffold_1958_9
RBG_16_Gallionellales_57_15_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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8600..9004
DNA (405bp) protein (135aa)
hypothetical protein id=12494656 bin=THIO_HI species=Acidithiobacillus ferrivorans genus=Acidithiobacillus taxon_order=Acidithiobacillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
Tax=RBG_16_Gallionellales_57_15_curated
RTP_02272018_0_2um_scaffold_1958_10
RBG_16_Gallionellales_57_15_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9001..9168
DNA (168bp) protein (56aa)
hypothetical protein id=12494655 bin=THIO_HI species=Burkholderia sp. SJ98 genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
Tax=RBG_16_Gallionellales_57_15_curated
Displaying 10 items

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