ggKbase home page

RTP_02272018_0_2um_scaffold_4360

Search features with annotation key words

Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_02272018_0_2um_scaffold_4360_1
Sideroxydans lithotrophicus, Sideroxydans, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..407
DNA (405bp) protein (135aa)
ribose 5-phosphate isomerase (EC:5.3.1.6)
Ribose-5-phosphate isomerase A {ECO:0000256|HAMAP-Rule:MF_00170, ECO:0000256|SAAS:SAAS00020824}; EC=5.3.1.6 {ECO:0000256|HAMAP-Rule:MF_00170, ECO:0000256|SAAS:SAAS00087684};; Phosphoriboisomerase A {ECO:0000256|HAMAP-Rule:MF_00170}; TaxID=580332 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Sideroxydans.;" source="Sideroxydans lithotrophicus (strain ES-1).;"
Ribose-5-phosphate isomerase A n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CP37_SIDLE
RTP_02272018_0_2um_scaffold_4360_2
Thauera linaloolentis, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(418..606)
DNA (189bp) protein (63aa)
DNA gyrase inhibitor YacG n=1 Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6YVY8_9RHOO
zinc-binding protein
DNA gyrase inhibitor YacG {ECO:0000256|HAMAP-Rule:MF_00649, ECO:0000256|SAAS:SAAS00085446}; TaxID=1123367 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera linaloolentis 47Lol = DSM 12138.;"
RTP_02272018_0_2um_scaffold_4360_3
Candidatus Accumulibacter sp. SK-02, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(603..1355)
DNA (753bp) protein (251aa)
Cell division protein ZapD n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QJN4_AZOSU
Cell division protein ZapD {ECO:0000256|HAMAP-Rule:MF_01092, ECO:0000256|SAAS:SAAS00004483}; Z ring-associated protein D {ECO:0000256|HAMAP-Rule:MF_01092}; TaxID=1453999 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-02.;"
hypothetical protein
RTP_02272018_0_2um_scaffold_4360_4
Aquitalea magnusonii, Aquitalea, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1348..2031)
DNA (684bp) protein (228aa)
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; TaxID=332411 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Aquitalea.;" source="Aquitalea magnusonii.;"
Dephospho-CoA kinase n=1 Tax=mine drainage metagenome RepID=E6QRF4_9ZZZZ
Dephospho-CoA kinase
RTP_02272018_0_2um_scaffold_4360_5
CG_Gallio_03, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2028..2885)
DNA (858bp) protein (286aa)
Prepilin peptidase (EC:3.4.23.43)
Type 4 prepilin-like proteins leader peptide-processing enzyme n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CP04_SIDLE
Tax=CG_Gallio_03
RTP_02272018_0_2um_scaffold_4360_6
Methylobacillus flagellatus, Methylobacillus, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2888..4075)
DNA (1188bp) protein (396aa)
Type II secretion system protein n=1 Tax=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) RepID=Q1GZC8_METFK
type II secretion system protein
Type II secretion system protein {ECO:0000313|EMBL:ABE50409.1}; TaxID=265072 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylobacillus.;" source="Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875).;"
Displaying 6 items

View Taxonomy