ggKbase home page

RTP_02272018_0_2um_scaffold_4877

Search features with annotation key words

Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_02272018_0_2um_scaffold_4877_1
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

42..878
DNA (837bp) protein (279aa)
Pantothenate synthetase n=1 Tax=Methylovorus sp. (strain MP688) RepID=E4QKX1_METS6
panC; pantoate/beta-alanine ligase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_02272018_0_2um_scaffold_4877_2
RBG_19FT_COMBO_Gammaproteobacteria_61_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1146..1523
DNA (378bp) protein (126aa)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI000378A935
membrane protein
Tax=RBG_19FT_COMBO_Gammaproteobacteria_61_10_curated
RTP_02272018_0_2um_scaffold_4877_3
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1591..3048)
DNA (1458bp) protein (486aa)
Lysine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00252}; EC=6.1.1.6 {ECO:0000255|HAMAP-Rule:MF_00252};; Lysyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00252}; Short=LysRS {ECO:0000255|HAMAP-Rule:MF_00252};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
lysyl-tRNA synthetase n=1 Tax=Thiobacillus thioparus RepID=UPI0003717441
lysyl-tRNA synthetase
RTP_02272018_0_2um_scaffold_4877_4

Not on your lists

comp(3051..3950)
DNA (900bp) protein (300aa)
Peptide chain release factor 2 (RF-2) n=1 Tax=mine drainage metagenome RepID=E6QTQ4_9ZZZZ
Peptide chain release factor 2 (RF-2) {ECO:0000313|EMBL:CBI10626.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
prfB; peptide chain release factor 2
RTP_02272018_0_2um_scaffold_4877_5
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4213..4515
DNA (303bp) protein (101aa)
Uncharacterized protein n=2 Tax=Alcaligenes xylosoxydans xylosoxydans RepID=R4XL10_ALCXX
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_02272018_0_2um_scaffold_4877_6
Candidatus Accumulibacter sp. SK-02, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4571..5023)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RW18_ACCPU
Uncharacterized protein {ECO:0000313|EMBL:KFB77752.1}; Flags: Precursor;; TaxID=1453999 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-02.;"
hypothetical protein
Displaying 6 items

View Taxonomy