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RTP_02272018_0_2um_scaffold_3652

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_02272018_0_2um_scaffold_3652_1

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comp(3..269)
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6QQV0_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBI09621.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
CinA domain-containing protein
RTP_02272018_0_2um_scaffold_3652_2
Methylotenera versatilis, Methylotenera, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(266..745)
DNA (480bp) protein (160aa)
phosphatidylglycerophosphatase (EC:3.1.3.27)
Phosphatidylglycerophosphatase A {ECO:0000256|PIRNR:PIRNR006162}; EC=3.1.3.27 {ECO:0000256|PIRNR:PIRNR006162};; Phosphatidylglycerolphosphate phosphatase A {ECO:0000256|PIRNR:PIRNR006162}; TaxID=666681 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylotenera.;" source="Methylotenera versatilis (strain 301).;"
Phosphatidylglycerophosphatase n=1 Tax=Methylotenera sp. (strain 301) RepID=D7DL73_METS0
RTP_02272018_0_2um_scaffold_3652_3
GWA2_Gallionellales_60_142_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(735..1712)
DNA (978bp) protein (326aa)
thiamine-monophosphate kinase (EC:2.7.4.16)
Thiamine-monophosphate kinase id=1860622 bin=GWE2_Gallionellales_58_10 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
Tax=GWA2_Gallionellales_60_142_curated
RTP_02272018_0_2um_scaffold_3652_4

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comp(1699..2136)
DNA (438bp) protein (146aa)
N utilization substance protein B homolog (Protein NusB) n=1 Tax=mine drainage metagenome RepID=E6QQV3_9ZZZZ
N utilization substance protein B homolog (Protein NusB) {ECO:0000313|EMBL:CBI09624.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
NusB antitermination factor
RTP_02272018_0_2um_scaffold_3652_5

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comp(2133..2600)
DNA (468bp) protein (156aa)
6,7-dimethyl-8-ribityllumazine synthase (Lumazine synthase)(Riboflavin synthase beta chain) {ECO:0000313|EMBL:CBI09625.1}; EC=2.5.1.9 {ECO:0000313|EMBL:CBI09625.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
ribH; 6,7-dimethyl-8-ribityllumazine synthase (EC:2.5.1.9)
6,7-dimethyl-8-ribityllumazine synthase (Lumazine synthase)(Riboflavin synthase beta chain) n=1 Tax=mine drainage metagenome RepID=E6QQV4_9ZZZZ
RTP_02272018_0_2um_scaffold_3652_6

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comp(2612..3700)
DNA (1089bp) protein (363aa)
Riboflavin biosynthesis protein ribAB {ECO:0000313|EMBL:CBI09626.1}; EC=3.5.4.25 {ECO:0000313|EMBL:CBI09626.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II-like protein (EC:3.5.4.25 4.1.2.-)
Riboflavin biosynthesis protein ribAB n=1 Tax=mine drainage metagenome RepID=E6QQV5_9ZZZZ
RTP_02272018_0_2um_scaffold_3652_7

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comp(3697..4293)
DNA (597bp) protein (199aa)
Riboflavin synthase alpha chain {ECO:0000313|EMBL:CBI09627.1}; EC=2.5.1.9 {ECO:0000313|EMBL:CBI09627.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
riboflavin synthase subunit alpha (EC:2.5.1.9)
Riboflavin synthase alpha chain n=1 Tax=mine drainage metagenome RepID=E6QQV6_9ZZZZ
RTP_02272018_0_2um_scaffold_3652_8

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comp(4307..4915)
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6QQV7_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBI09628.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
Displaying 8 items

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