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RTP_02272018_0_2um_scaffold_299

Search features with annotation key words

Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_02272018_0_2um_scaffold_299_1
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..570)
DNA (570bp) protein (190aa)
Putative uncharacterized protein id=1349958 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_299_2

Not on your lists

comp(567..1649)
DNA (1083bp) protein (361aa)
Beta-hexosaminidase (N-acetyl-beta-glucosaminidase) (Beta-N-acetylhexosaminidase) {ECO:0000313|EMBL:CBI10465.1}; EC=3.2.1.52 {ECO:0000313|EMBL:CBI10465.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Beta-hexosaminidase (N-acetyl-beta-glucosaminidase) (Beta-N-acetylhexosaminidase) n=1 Tax=mine drainage metagenome RepID=E6QT93_9ZZZZ
glycoside hydrolase family 3 domain protein
RTP_02272018_0_2um_scaffold_299_3
GWA2_Gallionellales_54_124_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1646..2026)
DNA (381bp) protein (127aa)
Holo-[acyl-carrier-protein] synthase n=1 Tax=Pseudogulbenkiania ferrooxidans 2002 RepID=B9Z2A0_9NEIS
holo-acyl-carrier-protein synthase
Tax=GWA2_Gallionellales_54_124_curated
RTP_02272018_0_2um_scaffold_299_4
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2023..2883)
DNA (861bp) protein (287aa)
radical SAM protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037DF380
hypothetical protein
Tax=RBG_16_Betaproteobacteria_58_11_curated
RTP_02272018_0_2um_scaffold_299_5
BJP_IG2103_Dechloromonas_60_92, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2990..3706)
DNA (717bp) protein (239aa)
RNA ligase domain, REL/Rln2 n=1 Tax=Nitrosomonas sp. AL212 RepID=F9ZHD9_9PROT
RNA ligase domain, REL/Rln2
Tax=BJP_IG2103_Dechloromonas_60_92
RTP_02272018_0_2um_scaffold_299_6
Dickeya dadantii, Dickeya, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3710..4246)
DNA (537bp) protein (179aa)
hypothetical protein n=1 Tax=Cupriavidus sp. WS RepID=UPI00035F7F73
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACS87448.1}; TaxID=579405 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Dickeya.;" source="Dickeya dadantii (strain Ech703).;"
RTP_02272018_0_2um_scaffold_299_7
GWC1_Azotobacter_66_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4243..5634)
DNA (1392bp) protein (464aa)
Putative uncharacterized protein n=1 Tax=Aeromonas salmonicida subsp. salmonicida 01-B526 RepID=G7D147_AERSA
Hypothetical protein
Tax=GWC1_Azotobacter_66_9_curated
RTP_02272018_0_2um_scaffold_299_8

Not on your lists

comp(5763..6014)
DNA (252bp) protein (84aa)
Putative DNA methylase N-4/N-6 {ECO:0000313|EMBL:CBI04039.1}; EC=2.1.1.113 {ECO:0000313|EMBL:CBI04039.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Putative DNA methylase N-4/N-6 n=1 Tax=mine drainage metagenome RepID=E6QA13_9ZZZZ
adenine specific DNA methylase Mod
RTP_02272018_0_2um_scaffold_299_9

Not on your lists

comp(6179..6397)
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=uncultured bacterium A1Q1_fos_550 RepID=L7VWT4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AGC71518.1}; TaxID=1256583 species="Bacteria; environmental samples.;" source="uncultured bacterium A1Q1_fos_550.;"
RTP_02272018_0_2um_scaffold_299_10
Burkholderia sp. Ch1-1, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7047..7904)
DNA (858bp) protein (286aa)
Putative Zn peptidase n=1 Tax=Burkholderia sp. Ch1-1 RepID=I2ICQ0_9BURK
Putative Zn peptidase {ECO:0000313|EMBL:EIF28502.1}; TaxID=243261 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. Ch1-1.;"
hypothetical protein
RTP_02272018_0_2um_scaffold_299_11
Ricinus communis, Ricinus, Malpighiales, rosids, Streptophyta, Viridiplantae

Not on your lists

comp(7901..8224)
DNA (324bp) protein (108aa)
XRE family transcriptional regulator n=1 Tax=Burkholderia pseudomallei RepID=UPI00016B0995
Putative uncharacterized protein {ECO:0000313|EMBL:EEF23370.1}; TaxID=3988 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus.;" source="Ricinus communis (Castor bean).;"
XRE family transcriptional regulator
RTP_02272018_0_2um_scaffold_299_12
Mumia flava, Mumia, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8423..9580
DNA (1158bp) protein (386aa)
hypothetical protein n=1 Tax=Burkholderia pseudomallei RepID=UPI00016B0996
Metallohydrolase {ECO:0000313|EMBL:KHL10259.1}; TaxID=1348852 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Mumia.;" source="Mumia flava.;"
hypothetical protein
RTP_02272018_0_2um_scaffold_299_13
Herminiimonas arsenicoxydans, Herminiimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9588..11828
DNA (2241bp) protein (747aa)
Uncharacterized protein n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G9X2_HERAR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAL63309.1}; TaxID=204773 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herminiimonas.;" source="Herminiimonas arsenicoxydans.;"
RTP_02272018_0_2um_scaffold_299_14
Burkholderia graminis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12001..12798
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Burkholderia graminis C4D1M RepID=B1G3F8_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EDT09173.1}; TaxID=396598 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia graminis C4D1M.;"
hypothetical protein
RTP_02272018_0_2um_scaffold_299_15
BJP_IG2103_Dechloromonas_60_92, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13358..14080)
DNA (723bp) protein (241aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0003172CDF
mobA/MobL family protein
Tax=BJP_IG2103_Dechloromonas_60_92
RTP_02272018_0_2um_scaffold_299_16
Candidatus Accumulibacter sp. SK-02, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14621..15943
DNA (1323bp) protein (441aa)
Glycyl-glycine endopeptidase ALE-1 {ECO:0000313|EMBL:KFB75759.1}; EC=3.4.24.75 {ECO:0000313|EMBL:KFB75759.1};; Flags: Precursor;; TaxID=1453999 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-02.;"
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI00036FE83F
peptidase M23
RTP_02272018_0_2um_scaffold_299_17
Pseudomonas sp. G5(2012), Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16174..18078)
DNA (1905bp) protein (635aa)
Putative uncharacterized protein n=1 Tax=Vibrio furnissii CIP 102972 RepID=C9PFI9_VIBFU
Uncharacterized protein {ECO:0000313|EMBL:EPA97878.1}; TaxID=1268068 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. G5(2012).;"
hypothetical protein
RTP_02272018_0_2um_scaffold_299_18
GWC2_Geobacteraceae_55_20_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18075..18590)
DNA (516bp) protein (172aa)
hypothetical protein n=1 Tax=Enterobacter agglomerans RepID=UPI00026D2154
hypothetical protein
Tax=GWC2_Geobacteraceae_55_20_curated
RTP_02272018_0_2um_scaffold_299_19
Pseudomonas sp. G5(2012), Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18584..19123)
DNA (540bp) protein (180aa)
hypothetical protein n=1 Tax=Enterobacter agglomerans RepID=UPI00026D2155
Uncharacterized protein {ECO:0000313|EMBL:EPA97876.1}; TaxID=1268068 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. G5(2012).;"
hypothetical protein
RTP_02272018_0_2um_scaffold_299_20
unknown

Not on your lists

comp(19126..19446)
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Klebsiella pneumoniae BWH 28 RepID=V3JSE2_KLEPN
RTP_02272018_0_2um_scaffold_299_21
Herminiimonas arsenicoxydans, Herminiimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20013..20348
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G2I9_HERAR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAL60726.1}; TaxID=204773 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herminiimonas.;" source="Herminiimonas arsenicoxydans.;"
RTP_02272018_0_2um_scaffold_299_22
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20470..21432
DNA (963bp) protein (321aa)
hypothetical protein n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI00026249F5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ46404.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
RTP_02272018_0_2um_scaffold_299_23
Tolumonas auensis, Tolumonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21595..22563
DNA (969bp) protein (323aa)
hypothetical protein n=1 Tax=Oceanimonas smirnovii RepID=UPI00035CE94B
phage-type endonuclease
Phage-type endonuclease {ECO:0000313|EMBL:ACQ93878.1}; TaxID=595494 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Tolumonas.;" source="Tolumonas auensis (strain DSM 9187 / TA4).;"
RTP_02272018_0_2um_scaffold_299_24
Aquitalea magnusonii, Aquitalea, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22656..23540
DNA (885bp) protein (295aa)
hypothetical protein n=1 Tax=Oceanimonas smirnovii RepID=UPI00037858BC
Uncharacterized protein {ECO:0000313|EMBL:KJV24662.1}; TaxID=332411 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Aquitalea.;" source="Aquitalea magnusonii.;"
hypothetical protein
RTP_02272018_0_2um_scaffold_299_25
Burkholderia pseudomallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23631..24398)
DNA (768bp) protein (256aa)
Lipoprotein, putative n=3 Tax=Burkholderia pseudomallei RepID=A3P003_BURP0
Putative lipoprotein {ECO:0000313|EMBL:KGW11645.1}; TaxID=1435370 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia pseudomallei MSHR4000.;"
lipoprotein
RTP_02272018_0_2um_scaffold_299_26
Janthinobacterium sp. Marseille, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24487..24903)
DNA (417bp) protein (139aa)
Uncharacterized conserved protein n=1 Tax=Janthinobacterium sp. (strain Marseille) RepID=A6SWN2_JANMA
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:ABR91935.1}; TaxID=375286 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. (strain Marseille) (Minibacterium massiliensis).;"
RTP_02272018_0_2um_scaffold_299_27

Not on your lists

comp(24914..25270)
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DVV5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD97938.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
RTP_02272018_0_2um_scaffold_299_28
Ferriphaselus amnicola, Ferriphaselus, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25316..26101)
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9E1D7_9BURK
Uncharacterized protein {ECO:0000313|EMBL:GAO32625.1}; TaxID=1188319 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Ferriphaselus.;" source="Ferriphaselus amnicola.;"
hypothetical protein
RTP_02272018_0_2um_scaffold_299_29
GWA2_Gallionellales_55_18_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26226..26654
DNA (429bp) protein (143aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0003118DB3
hypothetical protein
Tax=GWA2_Gallionellales_55_18_curated
RTP_02272018_0_2um_scaffold_299_30
Vibrio halioticoli, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27278..28189
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Vibrio halioticoli NBRC 102217 RepID=V5F276_9VIBR
Uncharacterized protein {ECO:0000313|EMBL:GAD89229.1}; TaxID=1219072 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio halioticoli NBRC 102217.;"
putative uncharacterized protein
Displaying items 1-30 of 52 in total

View Taxonomy